DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3638 and Ttyh2

DIOPT Version :10

Sequence 1:NP_726720.3 Gene:CG3638 / 31071 FlyBaseID:FBgn0261444 Length:1472 Species:Drosophila melanogaster
Sequence 2:NP_001385533.1 Gene:Ttyh2 / 287803 RGDID:1562969 Length:532 Species:Rattus norvegicus


Alignment Length:605 Identity:146/605 - (24%)
Similarity:235/605 - (38%) Gaps:139/605 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LHSIPHVNYTFRRVNDTFNPDSDVYLESLV---ILASIPAGLLIGSLLGLLLYLLTRCCDRRQRK 72
            |||:||:....:||:.||:|..:.|.|||:   :||:|..||   :|:.|.:||:..||.||...
  Rat    17 LHSVPHLGLRLQRVDSTFSPSDETYQESLLFLGMLAAIGLGL---NLIFLAIYLVCTCCCRRDHT 78

  Fly    73 PSAQRCQSC----SLVIITLMTCAAIGLGLYGNDDFHNGLLQAF----GSGKSVEGLVLTLKRQT 129
            ...::..||    :.|:..|:.|||:|:|.|||.:.::|:.|..    .:..:..|:...:...|
  Rat    79 VQTKQPDSCCVTWTAVMAGLLCCAAVGVGFYGNSETNDGVHQLIYSLDNANHTFSGMDELVSGNT 143

  Fly   130 ESIKHDLETRMAGHKVEQLVEKPHYNQTVVMLLIETSRLVTENTSRAVASLDSMVHYFMKAKGSE 194
            :.:|.|||..:| ...|....:..|.||:..:......:|.:.:...|              ..|
  Rat   144 QKMKVDLEQHLA-RLSEIFAARGDYMQTLKFMQQMAGNIVNQLSGLPV--------------WRE 193

  Fly   195 NDTSLMGLLQLGEFYESIRWPATLAFLTVLLLLCTVLVIGVARRSRCTLIFFSVSGLFCIIICWL 259
            ....|..|.....:.|..||.:.|....:.|::|.|..:|:||||:|.|......|:..:::.|.
  Rat   194 VTEELTALSHQTAYVEHYRWLSYLLLFILDLVICLVTCLGLARRSKCLLASMLCCGILALVLSWA 258

  Fly   260 LAGVYLASSVAAGDFCMRPHDYMCRQVGMRSPYVDFLNCGTPRNRFILRLNESRDLVDRARESVE 324
            ......|::|...||||.|..|:......:        ..:...|:.|..::|:  :...::|:.
  Rat   259 SLAADAAAAVGTSDFCMVPDVYILNNTQNQ--------ISSEVTRYYLHCSQSQ--ISPFQQSLT 313

  Fly   325 HMQRMSQETYPHIDIQRTLN-------AMDNDL---EITLRNLTT----LSATLDRRTIDMHYEE 375
            ..||  ..|...|.:...|.       ..:.||   ::.|.|..|    |:|.||.|.:...|.:
  Rat   314 IFQR--SLTTMQIQVVGLLQFAVPLFPTAEKDLLGIQLLLNNSETSLHQLTAMLDCRGLHKDYLD 376

  Fly   376 ALRGLCGGGLLGLSLMMVAGLLTSFLLTILVYADSHAWIYLTKRPTLDADKSETAPLFPASNAPS 440
            ||.|:|..|:.||..:.:..||.:...:.|..|...||.:...|.....|..:..|..|.:    
  Rat   377 ALTGICYDGIEGLLFLGLFSLLAALAFSTLTCAGPRAWKHFINRDRDYDDIDDDDPFNPQA---- 437

  Fly   441 ASISPTAPLSTGTINRTLLHHQQASSGGGSGTLPGSGGGAGAGGGVGANGHNGVGPYRNGSAGLR 505
                           |.:..|..|     .|.|                 |:    :.:.|:|| 
  Rat   438 ---------------RRIAAHNPA-----RGQL-----------------HS----FCSYSSGL- 460

  Fly   506 QGLASPSSQSSHTSSTATYNNGTTSYHNSHQQHNNH--LYSNHYSHSNNHYNNTQHRTNPAAGAV 568
                  .||.|....|.|.:|...|      ::.|.  |:.     .|..|.|            
  Rat   461 ------GSQCSLQPPTQTISNAPVS------EYMNQAILFG-----GNPRYEN------------ 496

  Fly   569 AAAVGVVSSGQRSPSPPPVY 588
               |.::..|    ||||.|
  Rat   497 ---VPLIGRG----SPPPTY 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3638NP_726720.3 Tweety 4..438 CDD:461475 118/451 (26%)
Ttyh2NP_001385533.1 Tweety 10..436 CDD:461475 117/448 (26%)

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