DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11398 and znf438

DIOPT Version :10

Sequence 1:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_001070629.1 Gene:znf438 / 798757 ZFINID:ZDB-GENE-060929-868 Length:746 Species:Danio rerio


Alignment Length:312 Identity:66/312 - (21%)
Similarity:99/312 - (31%) Gaps:115/312 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 HACDACGRVFQKHNALVDHMNAHNDVRNYPCPECPARFVQRSNRECHLKNVHRKVYLHSCPEPG- 148
            |.|..|.|.||..:.|..|||:|:::|.|.||.|...:....:...|:|..|.:    |.|... 
Zfish   452 HRCPTCNRCFQFKHHLQSHMNSHSNLRPYVCPVCRKAYAHSGSLSTHMKLHHAE----SKPRKSL 512

  Fly   149 ----CKKRFQQRRECDQHVKTVH-----------QNERN------------------------LV 174
                |:|.|........|::.||           |:|.:                        :.
Zfish   513 CCEFCEKSFGYVGVYFSHLREVHRVILTVEPSISQHEESISVEESSEIDEQASEQRVDPVELQIK 577

  Fly   175 CDTCSARFSHPVNYRKHL---------------ASHGSAKSYGCPICGKL------FGRPENRDV 218
            |..|.|......:.:.||               |.||..::.     .:|      :.|..|...
Zfish   578 CGRCQAITPTFADMKLHLLYVHGEEVQVRLRDGAMHGGREAE-----DELVKHAAHYWRQLNEKR 637

  Fly   219 HLFVHSICKAYICSVCGADYMRRNQLIRHGLASGHHNDP-----------------------IVR 260
            :| ||       |..|..::...:: .:|.|.|.|...|                       .:|
Zfish   638 NL-VH-------CGTCNEEFFSFSK-FKHHLHSNHQESPEEEEEEEEKEEKMVIGKGLSKDISLR 693

  Fly   261 QKPQFSPALAAK--NRSQR-----SAIDESQDEELQWLKGVDALDSAGYLEN 305
            ....|:..|.:|  |:.|.     ||....::..|.|    |.||..|  ||
Zfish   694 VGSHFNCILCSKVFNKKQEVIEHWSAQHNCENPTLLW----DVLDFKG--EN 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368
C2H2 Zn finger 87..107 CDD:275368 9/19 (47%)
C2H2 Zn finger 115..136 CDD:275368 5/20 (25%)
C2H2 Zn finger 144..165 CDD:275368 5/25 (20%)
C2H2 Zn finger 175..195 CDD:275368 6/34 (18%)
C2H2 Zn finger 203..223 CDD:275368 4/25 (16%)
C2H2 Zn finger 231..247 CDD:275368 2/15 (13%)
znf438NP_001070629.1 Herpes_BLLF1 <113..>292 CDD:282904
zf-C2H2 452..474 CDD:395048 10/21 (48%)
C2H2 Zn finger 454..474 CDD:275368 9/19 (47%)
zf-H2C2_2 466..491 CDD:463886 10/24 (42%)
C2H2 Zn finger 482..502 CDD:275368 5/19 (26%)
C2H2 Zn finger 514..532 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.