DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11398 and CG7987

DIOPT Version :9

Sequence 1:NP_001259122.2 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster


Alignment Length:470 Identity:86/470 - (18%)
Similarity:148/470 - (31%) Gaps:174/470 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ALLPHT------------------YEDEELSLNTEELQFEELN---ERSQHQQGGSPS------- 49
            ||:.||                  :::..|..:.:..||||.|   :.:..::.||.|       
  Fly   355 ALVSHTKNHRVDSPFECNQCQEMFWDNSSLQEHQKTHQFEESNSEYDPASAEESGSESEADEQLY 419

  Fly    50 --FVCRRCPALFLTREELAAHRPTHRYQGGQQT-----------------PASEHACDACGRVFQ 95
              |.|..|...|..::.|..|...|.....|..                 .:|.|.|:.||:.|.
  Fly   420 GEFYCNECGISFHRQDLLRRHAKMHCKPSDQAAVGSNSDVTAGGDVELAKDSSGHCCNTCGKSFP 484

  Fly    96 KHNALVDHMNAHNDVRNYPCPECPARFVQRSNRECHLKNVH------------------RKVYL- 141
            ....::.|...|.....:.|..|...|.:....:.||...|                  ||..: 
  Fly   485 SALEMLAHAEIHARFPPFKCVLCGISFYEEQAIKRHLHTRHPSELNANSCVLCGKECRDRKALIK 549

  Fly   142 ----------HSCPEPGCKKRFQQRRECDQHVKTVHQNERNLVCDTCSARFSHPVNYRKHLASHG 196
                      |||.:  |.|.|..:....:|:.:  ..::::||:.|...|........|..||.
  Fly   550 HAWDHSREKCHSCSK--CGKNFHNKARLKRHMAS--HRDKSVVCEVCQEEFPDGRTLSNHRHSHS 610

  Fly   197 S---AKSYGCPICGKLFGRPENRDVHLFVH----------------------------------- 223
            :   .|.:.|..|||.||...::.:|:.:|                                   
  Fly   611 TTTPGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYA 675

  Fly   224 -SIC-------------------------KAYICSVCGADYMRRNQLIRHGLASGHHND------ 256
             |:|                         ..|.|:||..|....|.||:|.:   .|:|      
  Fly   676 CSVCPRAFNQRVVLREHIRSHHSGLDVARNTYHCTVCSEDLASSNDLIQHLI---QHSDSNTAKQ 737

  Fly   257 --PIV-----RQKPQFSPALAAKNRSQRSAIDESQDEELQWLKGVDALDSAGYLENSQFSNTGKM 314
              |:.     :::.:..|...|..|:....::..::|.:.  :| ||.:.|..::...|      
  Fly   738 RQPVTGPRKYKRRRKLQPHEIAHMRAANKHVNGDEEEAIG--EG-DAEECASDIDFCDF------ 793

  Fly   315 TAIFAEDENESELFN 329
                 :.||..::|:
  Fly   794 -----DVENVDDIFD 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_001259122.2 C2H2 Zn finger 52..72 CDD:275368 5/19 (26%)
C2H2 Zn finger 87..107 CDD:275368 5/19 (26%)
C2H2 Zn finger 115..136 CDD:275368 5/20 (25%)
C2H2 Zn finger 144..165 CDD:275368 5/20 (25%)
C2H2 Zn finger 175..195 CDD:275368 4/19 (21%)
C2H2 Zn finger 203..223 CDD:275368 7/19 (37%)
C2H2 Zn finger 231..247 CDD:275368 7/15 (47%)
CG7987NP_650375.1 C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..186 CDD:275368
COG5048 326..734 CDD:227381 73/385 (19%)
C2H2 Zn finger 343..363 CDD:275368 4/7 (57%)
C2H2 Zn finger 371..391 CDD:275368 1/19 (5%)
C2H2 Zn finger 424..444 CDD:275368 5/19 (26%)
C2H2 Zn finger 476..496 CDD:275368 5/19 (26%)
C2H2 Zn finger 504..523 CDD:275368 5/18 (28%)
C2H2 Zn finger 534..554 CDD:275370 2/19 (11%)
C2H2 Zn finger 562..582 CDD:275370 5/23 (22%)
C2H2 Zn finger 589..609 CDD:275368 4/19 (21%)
C2H2 Zn finger 620..640 CDD:275368 7/19 (37%)
C2H2 Zn finger 648..668 CDD:275368 0/19 (0%)
zf-H2C2_2 661..685 CDD:290200 2/23 (9%)
C2H2 Zn finger 676..696 CDD:275368 2/19 (11%)
C2H2 Zn finger 709..726 CDD:275371 7/16 (44%)
Hph 921..>1017 CDD:290417
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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