DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11398 and Neu2

DIOPT Version :9

Sequence 1:NP_001259122.2 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:245 Identity:63/245 - (25%)
Similarity:90/245 - (36%) Gaps:28/245 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PSFVCRRCPALFLTREELAAHRPTHRYQGGQQTPASEHACDACGRVFQKHNALVDHMNAHNDVRN 112
            |.|.|..||..|..:..|..|..:|       |......|..|.:.|...:.|.:||..|...|.
  Fly   117 PGFSCSHCPKSFQVKSNLKVHMRSH-------TGERPFTCSLCPKSFGYSSGLQNHMRTHTGERP 174

  Fly   113 YPCPECPARFVQRSNRECHLKNVHRKVYLHSCPEPGCKKRFQQRRECDQHVKTVHQNERNLVCDT 177
            :.|..||..|....:.:.|::...|:..|. ||.  |:|.|.......||:.| |.:|....|..
  Fly   175 FQCSHCPRSFTAGHHLKAHIQMHERRGSLR-CPY--CQKCFLTSLILKQHLAT-HTDETQFKCSQ 235

  Fly   178 CSARFSHPVNYRKHLASHGSAKSYGCPICGKLFGRPENRDVHLFVHSIC---------------K 227
            ||..|........|:..| ..:.:.|..|.|.|........||..::.|               |
  Fly   236 CSKSFQVEHELWMHMRVH-QERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHSK 299

  Fly   228 AYICSVCGADYMRRNQLIRHGLASGHHNDPIVRQKPQFSPALAAKNRSQR 277
            |..|..|...:..|:.|..| |.|...|.|::....:.|.:..|.:.:||
  Fly   300 ALKCGKCPKTFTDRSALSTH-LKSHTKNKPLLEGPCKSSGSKPAHSNAQR 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_001259122.2 C2H2 Zn finger 52..72 CDD:275368 6/19 (32%)
C2H2 Zn finger 87..107 CDD:275368 6/19 (32%)
C2H2 Zn finger 115..136 CDD:275368 5/20 (25%)
C2H2 Zn finger 144..165 CDD:275368 7/20 (35%)
C2H2 Zn finger 175..195 CDD:275368 5/19 (26%)
C2H2 Zn finger 203..223 CDD:275368 6/19 (32%)
C2H2 Zn finger 231..247 CDD:275368 4/15 (27%)
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 37/132 (28%)
C2H2 Zn finger 121..141 CDD:275368 6/19 (32%)
zf-H2C2_2 133..158 CDD:290200 7/31 (23%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
zf-H2C2_2 162..185 CDD:290200 8/22 (36%)
C2H2 Zn finger 177..197 CDD:275368 5/19 (26%)
C2H2 Zn finger 205..225 CDD:275368 8/22 (36%)
zf-C2H2_8 206..286 CDD:292531 22/83 (27%)
C2H2 Zn finger 233..253 CDD:275368 5/19 (26%)
C2H2 Zn finger 260..297 CDD:275368 7/36 (19%)
C2H2 Zn finger 303..323 CDD:275368 6/20 (30%)
C2H2 Zn finger 353..373 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446561
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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