DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11398 and CG10274

DIOPT Version :9

Sequence 1:NP_001259122.2 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster


Alignment Length:495 Identity:93/495 - (18%)
Similarity:145/495 - (29%) Gaps:199/495 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 HTYEDEELSLNTE-------ELQFEELNERSQH--QQGGSP--SFVCRRCPALFLTREELAAHRP 70
            ||...|..|.|.:       .::....:.:..|  .:..:|  .:.|..|..:|.....|..|..
  Fly   322 HTELSEVHSCNVDGCGKTFPRIRLLTFHMKKMHGITKAAAPPRDYPCTECEKVFRCPMALKKHMY 386

  Fly    71 THRYQGGQQTPASEHACDACGRVFQKHNALVDHMNAHNDVRNYPCPECPA-------------RF 122
            .|   .|::.|   ..|:.||:.|..::||.||:..|..::||.||.|..             ..
  Fly   387 KH---DGKELP---FPCNICGKRFVINSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTHILTH 445

  Fly   123 VQRSNREC---------------HLKNVHRKVYLHSCPEPGCKKRFQQRRECDQHVKTVHQNERN 172
            .|....:|               |:|.||.|:..::|..  |.|.|.:...|..|..| |..|:.
  Fly   446 TQEKKFKCHICEHASHNKQSLANHIKIVHEKIKNYACQY--CGKTFGKSHACKIHEMT-HTGEKR 507

  Fly   173 LVCDTCSARFSHPVNYRKHLASH------------------------------------------ 195
            ..|..|..:|.:|.:..|||.:|                                          
  Fly   508 CECKVCGKKFLYPKSLTKHLKTHEKRVLRAIETYRQRQVEMGETPGEQFDNPPAPPVEGISIEPI 572

  Fly   196 ------------------------------------GSA-------------------------- 198
                                                |:|                          
  Fly   573 MSRNAADELLKVCAESVATIPKDPRRVQRVDLAQLAGTAVNPIPSVSVPSWSPQVNFTKKEGKHI 637

  Fly   199 -------------------------KSYGCPICGKLFGRPENRDVHLFVHSICKAYICSVCGADY 238
                                     |.:.|..|.|.|.:.:....|.::|:..|.:.|..||..:
  Fly   638 CPGCGQGFNNIGNMKRHYKIIHEKVKDFACRFCPKRFAKAQTLRHHEWIHTGEKPFECKTCGTHF 702

  Fly   239 MRRNQLIRHGLASGHHNDPIVRQKPQFSPA---LAAKNRSQRSA----------IDESQDEELQW 290
            .:...|.||  ...|.|.|.| ..|:|..|   |..:.||:|.|          |.|:..|:|..
  Fly   703 RQETALKRH--QRTHENRPPV-ISPKFYAAREELEEQERSKREAKRQADAKRREIAEAAKEQLSS 764

  Fly   291 LKGVDALDSAGYLENSQFSNTGKMTAIFAE------DENE 324
            |..:::.|.:.:..:.......:..|..||      :|||
  Fly   765 LHKLESSDRSLHSYDEYQEAAAERAAASAELQAQQFEENE 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_001259122.2 C2H2 Zn finger 52..72 CDD:275368 5/19 (26%)
C2H2 Zn finger 87..107 CDD:275368 8/19 (42%)
C2H2 Zn finger 115..136 CDD:275368 7/48 (15%)
C2H2 Zn finger 144..165 CDD:275368 6/20 (30%)
C2H2 Zn finger 175..195 CDD:275368 7/19 (37%)
C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..247 CDD:275368 4/15 (27%)
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871
C2H2 Zn finger 334..353 CDD:275368 0/18 (0%)
C2H2 Zn finger 368..388 CDD:275368 5/19 (26%)
COG5048 394..729 CDD:227381 61/343 (18%)
C2H2 Zn finger 397..417 CDD:275368 8/19 (42%)
C2H2 Zn finger 425..445 CDD:275368 3/19 (16%)
C2H2 Zn finger 453..474 CDD:275368 3/20 (15%)
C2H2 Zn finger 482..502 CDD:275368 7/22 (32%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
C2H2 Zn finger 638..659 CDD:275368 0/20 (0%)
C2H2 Zn finger 667..687 CDD:275368 5/19 (26%)
zf-H2C2_2 680..704 CDD:290200 6/23 (26%)
C2H2 Zn finger 695..715 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449828
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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