DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11398 and zf30C

DIOPT Version :9

Sequence 1:NP_001259122.2 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:271 Identity:62/271 - (22%)
Similarity:106/271 - (39%) Gaps:55/271 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 HTYEDEELSLNTEELQFEELNERSQHQQGGSPSFVCRRCPALFLTREELAAHRPTHRYQG----- 76
            |..:|.:  ||..|:: |...:...|.:.....|.|..|..::|..:.|..|...|...|     
  Fly   421 HLRDDHK--LNEAEMK-EIFKDVDVHAKLDEEVFKCPICSKIYLVEKRLVTHMKVHGEDGKLTFK 482

  Fly    77 ---------GQQTPASEHA---------CDACGRVFQKHNALVDH-MNAH------NDVRNYPCP 116
                     ..:..|:|||         |:.|.:....|::|.:| .|.|      :..||..|.
  Fly   483 CPCYCNLFFATKEQATEHARAQHKELLYCEKCDKYMTGHDSLKNHERNFHSKKEPRSQQRNLICD 547

  Fly   117 ECPARFVQRSNRECHLKNVHRKVYLHSCPEPGCKKRFQQRRECDQHVKT---------VHQNERN 172
            :|..:|..|::...|:::...::.|:.|            ..|.:|:.|         :|:.:..
  Fly   548 KCGKKFTGRTSLSDHVRSDCGRLPLYGC------------SVCGKHLSTAGILKTHMLLHKADTP 600

  Fly   173 LVCDTCSARFSHPVNYRKHLAS-HGSAKSYGCPICGKLFGRPENRDVHLFVHSICKAYICSVCGA 236
            ..||.|...|.....|:.||.: |...|.|.|.:|.|.:...|:...|:.||:..|.::|:.||.
  Fly   601 YQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTHMTVHTGIKRFLCNNCGK 665

  Fly   237 DYMRRNQLIRH 247
            .:...:.|..|
  Fly   666 RFTCISNLQAH 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_001259122.2 C2H2 Zn finger 52..72 CDD:275368 5/19 (26%)
C2H2 Zn finger 87..107 CDD:275368 6/20 (30%)
C2H2 Zn finger 115..136 CDD:275368 5/20 (25%)
C2H2 Zn finger 144..165 CDD:275368 3/20 (15%)
C2H2 Zn finger 175..195 CDD:275368 7/20 (35%)
C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..247 CDD:275368 4/15 (27%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 6/20 (30%)
COG5048 <523..>672 CDD:227381 38/160 (24%)
C2H2 Zn finger 546..566 CDD:275368 5/19 (26%)
C2H2 Zn finger 575..595 CDD:275368 4/31 (13%)
C2H2 Zn finger 603..624 CDD:275368 7/20 (35%)
C2H2 Zn finger 632..652 CDD:275368 5/19 (26%)
C2H2 Zn finger 660..680 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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