DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11398 and CG15436

DIOPT Version :9

Sequence 1:NP_001259122.2 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:244 Identity:60/244 - (24%)
Similarity:96/244 - (39%) Gaps:34/244 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DEELSLNTEELQFE--ELNERSQ-----------HQQGGSPSFVCRRCPALFLTREELAAHRPTH 72
            |::...:::::.||  |.:::.|           |..|  .||.|..|...|..|..|.||..||
  Fly   114 DDDGKSDSKKVAFECRECHKKYQRKGTFLRHMRTHMDG--QSFPCPYCKRNFRLRVTLKAHMKTH 176

  Fly    73 RYQGGQQTPASEHACDACGRVFQKHNALVDHMNAHNDVRNYPCPECPARFVQRSNRECHLKNVHR 137
                   ..|..:.|..|.:.|.:.:.|..|...|...|.:.|.:|...|::.|:...|::.   
  Fly   177 -------NAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRT--- 231

  Fly   138 KVYLHSCPEP----GCKKRFQQRRECDQHVKTVHQNERNLVCDTCSARFSHPVNYRKHLASHGSA 198
                |....|    .|.|.|.::...|.|.:: |..||...|..|...|:...:.::|...|...
  Fly   232 ----HGSERPFKCSKCTKTFTRKFHLDNHFRS-HTGERPFKCSHCPKAFAMKQHLKQHSRLHLPD 291

  Fly   199 KSYGCPICGKLFGRPENRDVHLFVHSICKAYICSVCGADYMRRNQLIRH 247
            :.:.|..|.|.|........|..||:..:.:.|..|.:.|.:|..|.||
  Fly   292 RPFRCSHCPKTFRLSSTLKEHKLVHNAERTFKCPHCASFYKQRKTLARH 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_001259122.2 C2H2 Zn finger 52..72 CDD:275368 7/19 (37%)
C2H2 Zn finger 87..107 CDD:275368 5/19 (26%)
C2H2 Zn finger 115..136 CDD:275368 5/20 (25%)
C2H2 Zn finger 144..165 CDD:275368 6/24 (25%)
C2H2 Zn finger 175..195 CDD:275368 4/19 (21%)
C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..247 CDD:275368 5/15 (33%)
CG15436NP_608840.1 zf-AD 4..78 CDD:285071
C2H2 Zn finger 128..148 CDD:275368 2/19 (11%)
C2H2 Zn finger 156..176 CDD:275368 7/19 (37%)
COG5048 <180..341 CDD:227381 41/169 (24%)
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
zf-H2C2_2 197..219 CDD:290200 6/21 (29%)
C2H2 Zn finger 212..232 CDD:275368 5/26 (19%)
zf-H2C2_2 224..249 CDD:290200 6/31 (19%)
C2H2 Zn finger 240..260 CDD:275368 5/20 (25%)
zf-H2C2_2 252..276 CDD:290200 7/24 (29%)
C2H2 Zn finger 268..288 CDD:275368 4/19 (21%)
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
C2H2 Zn finger 324..341 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446531
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.