DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11398 and CG2116

DIOPT Version :10

Sequence 1:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster


Alignment Length:323 Identity:70/323 - (21%)
Similarity:117/323 - (36%) Gaps:77/323 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 CRRCPALFLTREELAAHRPTHRYQGGQQTPASEHACDACGRVFQKHNALVDHMNAHNDVRNYPCP 116
            |..||.: :.:.:|:.|..||...|     .:.:||..|...::....|..|...|..:|.|.|.
  Fly   256 CGICPDV-MHKSKLSKHHKTHLVPG-----TNRYACIYCTETYRDCKYLAGHARRHMGIRPYVCE 314

  Fly   117 ECPARFVQRSNRECHLKNVHRKVYLHSCPEPGCKKRFQQRRECDQHVKTVHQNERNLVCDTCSAR 181
            .|...|..:.:...|.:..|.:.. |.|..  |.|.|.|..:..:|.:..|:.:|...|:.|...
  Fly   315 LCTLYFSTKQDLRVHNQRRHLEKE-HICEV--CGKTFAQNTQLKRHREATHEKKRRFQCEYCQKA 376

  Fly   182 FSHPVNYRKHLAS-H-GSAKSYGCPICGKLFGRPENRDVHLF------VHSICKAYICSVCGADY 238
            :....:.::|:.: | |..:...||.||.     :.||.|..      :|.....|:|.:|..::
  Fly   377 YYKNFSLQEHIRNVHMGKRRMLKCPFCGM-----QCRDAHKMARHRKEMHLSQGTYVCHLCQEEF 436

  Fly   239 ------------------MRR------------NQLIRHGLASGHHND-----PIVRQKPQFSPA 268
                              .||            ::.|.....:|..:|     |:..:..:....
  Fly   437 TDISYFDAHKRSIQCRSNTRRFVNADGNREGSDSESISGRNMNGQDDDYDGMGPLQEEYDEDDGL 501

  Fly   269 LAAKNR-------SQRSAIDESQDEELQWLKGVDALDSAGYLENSQFSNTGKMTAIFAEDENE 324
            |...|:       |.|..:|||:.:.:| |...|  |....:||          |:.|||..|
  Fly   502 LVEDNQPEEQGSPSNRQYLDESEQQYVQ-LSDYD--DQHLLVEN----------AVDAEDGGE 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368 5/19 (26%)
C2H2 Zn finger 87..107 CDD:275368 4/19 (21%)
C2H2 Zn finger 115..136 CDD:275368 4/20 (20%)
C2H2 Zn finger 144..165 CDD:275368 6/20 (30%)
C2H2 Zn finger 175..195 CDD:275368 3/20 (15%)
C2H2 Zn finger 203..223 CDD:275368 7/25 (28%)
C2H2 Zn finger 231..247 CDD:275368 5/45 (11%)
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 5/19 (26%)
zf-C2H2_8 257..339 CDD:464935 20/88 (23%)
C2H2 Zn finger 285..305 CDD:275368 4/19 (21%)
PHA00733 <308..357 CDD:177301 13/51 (25%)
C2H2 Zn finger 313..334 CDD:275368 4/20 (20%)
C2H2 Zn finger 341..362 CDD:275368 6/22 (27%)
C2H2 Zn finger 370..388 CDD:275368 3/17 (18%)
C2H2 Zn finger 400..418 CDD:275370 7/22 (32%)
C2H2 Zn finger 429..447 CDD:275368 2/17 (12%)

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