DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11398 and CG3032

DIOPT Version :10

Sequence 1:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_572376.1 Gene:CG3032 / 31648 FlyBaseID:FBgn0029928 Length:431 Species:Drosophila melanogaster


Alignment Length:278 Identity:67/278 - (24%)
Similarity:99/278 - (35%) Gaps:76/278 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 QGGSPSFVCRRCPALFLTREELAAH---------RP--------THRYQGGQQTPASE------- 84
            :|...:..|..|...|..:..||||         ||        .:.:.||..|...|       
  Fly   150 RGSRNTLKCSVCRRSFAHQITLAAHIRKVHEGSKRPFQCDQCEKAYSFMGGLYTHIREVHAPKER 214

  Fly    85 -HACD--ACGRVF------QKHNALVDHMNAHNDVRNYPCPECPARFVQRSNRECHLKNVHRKVY 140
             |.||  .|.|::      |||..|.......:.::.:.|.:|.|.|.|.:|.:.|||..|....
  Fly   215 RHPCDQPGCERIYTSRIAMQKHKRLKHSPRDRDALKKFICEQCGASFNQSANLKYHLKTKHPTED 279

  Fly   141 LHSCPEPG---------CKKRFQQR------------------RECD-------------QHVKT 165
            ..:..|.|         |:|.|..|                  .||.             ||: .
  Fly   280 EVAAREGGAGERHFCDICQKEFHSRYTLKYHTLQQHEVQEELPHECQVCGRRMAKKFMLLQHM-L 343

  Fly   166 VHQNERNLVCDTCSARFSHPVNYRKHL-ASHGSAKSYGCPICGKLFGRPENRDVHLFVHSICKAY 229
            :|.|:: |.|:.|..||:.......|: |.|...|.:.|..|.:.|...:....|.::|:..|.|
  Fly   344 MHSNDK-LPCEHCGRRFARRFELEAHVRAVHLKLKPFPCHHCPESFASRKTLRHHEYIHTGEKPY 407

  Fly   230 ICSVCGADYMRRNQLIRH 247
            ||..||..:.::..|..|
  Fly   408 ICDTCGQAFRQQTCLKNH 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368 9/36 (25%)
C2H2 Zn finger 87..107 CDD:275368 8/27 (30%)
C2H2 Zn finger 115..136 CDD:275368 9/20 (45%)
C2H2 Zn finger 144..165 CDD:275368 10/60 (17%)
C2H2 Zn finger 175..195 CDD:275368 6/20 (30%)
C2H2 Zn finger 203..223 CDD:275368 4/19 (21%)
C2H2 Zn finger 231..247 CDD:275368 4/15 (27%)
CG3032NP_572376.1 zf-AD 13..95 CDD:462262
C2H2 Zn finger 158..179 CDD:275368 7/20 (35%)
C2H2 Zn finger 188..209 CDD:275368 4/20 (20%)
SFP1 <213..275 CDD:227516 18/61 (30%)
C2H2 Zn finger 218..239 CDD:275368 7/20 (35%)
C2H2 Zn finger 254..275 CDD:275368 9/20 (45%)
C2H2 Zn finger 294..315 CDD:275368 4/20 (20%)
C2H2 Zn finger 325..345 CDD:275368 3/20 (15%)
C2H2 Zn finger 352..373 CDD:275368 6/20 (30%)
C2H2 Zn finger 381..401 CDD:275368 4/19 (21%)
C2H2 Zn finger 409..429 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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