DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11398 and F56D1.1

DIOPT Version :10

Sequence 1:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_495042.3 Gene:F56D1.1 / 186375 WormBaseID:WBGene00018959 Length:454 Species:Caenorhabditis elegans


Alignment Length:133 Identity:35/133 - (26%)
Similarity:54/133 - (40%) Gaps:19/133 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DEELSLNTEELQFEELNERSQHQQGGSPSFVCRRCPALFLTREELAAHRPTHRYQGGQQTPAS-- 83
            |||:...|.|.. .::.:.|:.:..|  .|.|..|...|..|:.|..|...:..:..|:...|  
 Worm   310 DEEIEFGTTEPP-NKIRKHSRSRVHG--DFSCEICLKTFTLRDNLRKHVRVYHSENSQKVVKSTG 371

  Fly    84 -----EHACD---------ACGRVFQKHNALVDHMNAHNDVRNYPCPECPARFVQRSNRECHLKN 134
                 ::.||         .||:.|:...||.||.|.|:.::.|.|..|..:|..|.....||..
 Worm   372 PKHQEQYKCDRKSKDGDETTCGKTFRTEQALHDHFNVHDGIKPYSCHTCNQKFHARDRFAVHLSK 436

  Fly   135 VHR 137
            .|:
 Worm   437 YHQ 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368 6/19 (32%)
C2H2 Zn finger 87..107 CDD:275368 10/28 (36%)
C2H2 Zn finger 115..136 CDD:275368 6/20 (30%)
C2H2 Zn finger 144..165 CDD:275368
C2H2 Zn finger 175..195 CDD:275368
C2H2 Zn finger 203..223 CDD:275368
C2H2 Zn finger 231..247 CDD:275368
F56D1.1NP_495042.3 C2H2 Zn finger 67..87 CDD:275368
C2H2 Zn finger 94..116 CDD:275368
C2H2 Zn finger 338..359 CDD:275368 6/20 (30%)
C2H2 Zn finger 380..409 CDD:275368 10/28 (36%)
C2H2 Zn finger 417..434 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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