DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11398 and si:cabz01032454.3

DIOPT Version :9

Sequence 1:NP_001259122.2 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:XP_003198589.1 Gene:si:cabz01032454.3 / 100534979 ZFINID:ZDB-GENE-161017-73 Length:499 Species:Danio rerio


Alignment Length:286 Identity:81/286 - (28%)
Similarity:120/286 - (41%) Gaps:33/286 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KEAEILALLPHTYEDEELSLNTEELQFEELNERSQHQQGGSP----SFVCRRCPALFLTREELAA 67
            ::.|::.|...|.|..|:....:....::|....|.....||    .|:|.:|...|..:..|..
Zfish    25 EQTELMVLKEETQEMNEMKEKDQIETHQDLTTDEQSSCKRSPKTKSDFICSQCGKGFNHQPNLIV 89

  Fly    68 HRPTHRYQGGQQTPASEHACDACGRVFQKHNALVDHMNAHNDVRNYPCPECPARFVQRSNRECHL 132
            |...|       |....::||.||:.|.::..|..||..|...|.|.||:|...|.|:.:     
Zfish    90 HMRIH-------TGERPYSCDQCGKSFSQNEKLKVHMRVHTKERPYTCPQCGKSFTQKES----- 142

  Fly   133 KNVHRKVYLHSCPEP--GCKKRFQQRRECDQHVKTVHQNERNLVCDTCSARFSHPVNYRKHLASH 195
            .|||.:|:....|.|  .|.|||.|.....:|| |:|..||...|..|...|.|.....||:..|
Zfish   143 LNVHIRVHTGEKPFPCQHCGKRFSQLHALKEHV-TIHTGERPHACTVCGKTFYHKQKLEKHMTVH 206

  Fly   196 GSAKSYGCPICGKLFGRPENRDVHLFVHSIC------KAYICSVCGADYMRRNQLIRHGLASGHH 254
            ...|.:.|..|||.||:.::..:|:.:|:..      |.|||:.|...:..::.|       .||
Zfish   207 TGEKLFDCQQCGKRFGQKDSLRIHMKLHTKDKPHAKEKPYICTECDKAFASKSNL-------NHH 264

  Fly   255 NDPIVRQKPQFSPALAAKNRSQRSAI 280
            ......:|| ||.....|:..|.|.:
Zfish   265 MVTHTGEKP-FSCDECGKSFGQNSKL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_001259122.2 C2H2 Zn finger 52..72 CDD:275368 5/19 (26%)
C2H2 Zn finger 87..107 CDD:275368 8/19 (42%)
C2H2 Zn finger 115..136 CDD:275368 6/20 (30%)
C2H2 Zn finger 144..165 CDD:275368 9/22 (41%)
C2H2 Zn finger 175..195 CDD:275368 6/19 (32%)
C2H2 Zn finger 203..223 CDD:275368 7/19 (37%)
C2H2 Zn finger 231..247 CDD:275368 3/15 (20%)
si:cabz01032454.3XP_003198589.1 COG5048 52..481 CDD:227381 76/259 (29%)
C2H2 Zn finger 74..94 CDD:275368 5/19 (26%)
zf-H2C2_2 86..111 CDD:290200 9/31 (29%)
C2H2 Zn finger 102..122 CDD:275368 8/19 (42%)
zf-H2C2_2 115..139 CDD:290200 10/23 (43%)
C2H2 Zn finger 130..150 CDD:275368 8/24 (33%)
zf-H2C2_2 142..167 CDD:290200 10/29 (34%)
C2H2 Zn finger 158..178 CDD:275368 8/20 (40%)
C2H2 Zn finger 186..206 CDD:275368 6/19 (32%)
C2H2 Zn finger 214..234 CDD:275368 7/19 (37%)
C2H2 Zn finger 248..268 CDD:275368 5/26 (19%)
zf-H2C2_2 260..283 CDD:290200 8/30 (27%)
C2H2 Zn finger 276..296 CDD:275368 3/14 (21%)
zf-H2C2_2 289..313 CDD:290200 0/1 (0%)
C2H2 Zn finger 304..324 CDD:275368
zf-H2C2_2 317..341 CDD:290200
C2H2 Zn finger 332..352 CDD:275368
zf-H2C2_2 344..367 CDD:290200
C2H2 Zn finger 360..380 CDD:275368
C2H2 Zn finger 388..408 CDD:275368
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 444..464 CDD:275368
C2H2 Zn finger 472..492 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.