DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11398 and si:ch211-222k6.1

DIOPT Version :9

Sequence 1:NP_001259122.2 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster
Sequence 2:XP_021324960.1 Gene:si:ch211-222k6.1 / 100034531 ZFINID:ZDB-GENE-050208-649 Length:674 Species:Danio rerio


Alignment Length:214 Identity:67/214 - (31%)
Similarity:95/214 - (44%) Gaps:12/214 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EELNERSQHQQGGSPSFVCRRCPALFLTREELAAHRPTHRYQGGQQTPASEHACDACGRVFQKHN 98
            |.||:..:...|..| |.|.:|...||.:..|..|...|       |....|.||.||:.|....
Zfish   127 ERLNKHLKIHTGEKP-FTCDQCGKNFLHKGYLTEHIKIH-------TGEKPHTCDQCGKRFAYKG 183

  Fly    99 ALVDHMNAHNDVRNYPCPECPARFVQRSNRECHLKNVHRKVYLHSCPEPGCKKRFQQRRECDQHV 163
            .|.|||..|...|.|.|.:|..||..:.|...|:| :|.....:||.:  |.|:|:.:.....|:
Zfish   184 NLTDHMKVHTGERPYACDQCAKRFKHKGNLIEHVK-IHTGERPYSCDQ--CGKKFKLKHILSDHM 245

  Fly   164 KTVHQNERNLVCDTCSARFSHPVNYRKHLASHGSAKSYGCPICGKLFGRPENRDVHLFVHSICKA 228
            : :|..|:...|:.|...::...|...|:.||...|.:.|..|||.|.:.....|||..||..:.
Zfish   246 R-IHTGEKPFTCEKCGRSYTRKRNLSDHMKSHTGVKLHTCDQCGKSFVKTGVFKVHLRTHSRERP 309

  Fly   229 YICSVCGADYMRRNQLIRH 247
            :.|..||.|::|...|..|
Zfish   310 FNCDQCGKDFLRMGTLKVH 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11398NP_001259122.2 C2H2 Zn finger 52..72 CDD:275368 6/19 (32%)
C2H2 Zn finger 87..107 CDD:275368 9/19 (47%)
C2H2 Zn finger 115..136 CDD:275368 7/20 (35%)
C2H2 Zn finger 144..165 CDD:275368 5/20 (25%)
C2H2 Zn finger 175..195 CDD:275368 4/19 (21%)
C2H2 Zn finger 203..223 CDD:275368 8/19 (42%)
C2H2 Zn finger 231..247 CDD:275368 6/15 (40%)
si:ch211-222k6.1XP_021324960.1 C2H2 Zn finger 60..80 CDD:275368
C2H2 Zn finger 88..108 CDD:275368
C2H2 Zn finger 116..136 CDD:275368 3/8 (38%)
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
zf-H2C2_2 156..181 CDD:316026 10/31 (32%)
C2H2 Zn finger 172..192 CDD:275368 9/19 (47%)
COG5048 196..607 CDD:227381 42/137 (31%)
C2H2 Zn finger 200..220 CDD:275368 7/20 (35%)
C2H2 Zn finger 228..248 CDD:275368 5/22 (23%)
C2H2 Zn finger 256..276 CDD:275368 4/19 (21%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
C2H2 Zn finger 312..332 CDD:275368 7/17 (41%)
C2H2 Zn finger 340..360 CDD:275368
C2H2 Zn finger 368..388 CDD:275368
C2H2 Zn finger 396..416 CDD:275368
C2H2 Zn finger 424..444 CDD:275368
C2H2 Zn finger 452..472 CDD:275368
C2H2 Zn finger 480..500 CDD:275368
C2H2 Zn finger 508..528 CDD:275368
C2H2 Zn finger 536..556 CDD:275368
C2H2 Zn finger 564..584 CDD:275368
C2H2 Zn finger 592..612 CDD:275368
C2H2 Zn finger 620..640 CDD:275368
C2H2 Zn finger 648..666 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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