DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14628 and Ncoa5

DIOPT Version :9

Sequence 1:NP_569883.1 Gene:CG14628 / 31057 FlyBaseID:FBgn0040365 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001100013.1 Gene:Ncoa5 / 296372 RGDID:1307702 Length:578 Species:Rattus norvegicus


Alignment Length:25 Identity:9/25 - (36%)
Similarity:11/25 - (44%) Gaps:9/25 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 VDEY---------DDYSESDDEDGP 130
            ||:|         |.|.:|.|..||
  Rat   132 VDDYCRRKDDSYFDRYRDSFDGRGP 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14628NP_569883.1 RRM <19..>85 CDD:223796
RRM_SF 22..85 CDD:240668
Ncoa5NP_001100013.1 HisS <185..255 CDD:223202
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421126at33208
OrthoFinder 1 1.000 - - FOG0006056
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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