DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3655 and F39G3.2

DIOPT Version :9

Sequence 1:NP_001259118.1 Gene:CG3655 / 31056 FlyBaseID:FBgn0040397 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_504273.2 Gene:F39G3.2 / 185501 WormBaseID:WBGene00018207 Length:467 Species:Caenorhabditis elegans


Alignment Length:507 Identity:98/507 - (19%)
Similarity:176/507 - (34%) Gaps:139/507 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IPSLPIAYWSKNKNFLQQKSSTCAK--------YPSIFEL--------EFNNIYWQTLRTSNGTF 139
            |.:|.||.:     ||    |.|.|        .|::.::        .|..:::.|        
 Worm    13 ITNLLIALY-----FL----SACRKGVTETGFVAPTVLQIREKLEIDENFPIVFYST-------- 60

  Fly   140 QLFGAYYDIRRTSLLGPTVRILGMIDRIEPKVKTYCQFWFDGQKEPFIVK--TFEYKYIWYNKWG 202
                ||.|.|...   |.:|:..|...:..|.....:...:.:|:...::  ..|.:..|:  |.
 Worm    61 ----AYLDYRYKI---PRLRVFAMNPCVTHKEYMSAEIGLNQKKKKVKLRGEPTEGECPWH--WA 116

  Fly   203 NYKQGIYQPYLIACQIPKPFHGVVPSSVSMVEKECDTATNNLRVIYNRPPDDQKKGFAVCVKGLD 267
            .  |..|..|:...::.:. :|.....:..:....:..|.:|:|....|  .:|.||.|||:.:.
 Worm   117 T--QCFYNSYIWTAELGEA-NGTEMVGIDQITIHLNNRTISLKVQEVHP--KRKGGFTVCVQPVY 176

  Fly   268 FLYDDLSVRLIEWIEMLNILGADKIYFYNLQVHPNITKV---LNHYEQEGKVQVIPLTLPGGQP- 328
            :..:..::.|  :||.....|..:...|   .|.:.|:|   |.:|...|.:::.|....|..| 
 Worm   177 WYSEYHNIAL--FIETWRSQGVTRFIVY---YHSSTTQVRNLLEYYRNLGILRLRPWPSFGRLPT 236

  Fly   329 ------NVPGFQHLYLTKKTNHKRQNEVIPYNDCLYKNLYLYDYI-ALLDIDEVIM--------- 377
                  .:|.|.       ::..|....:..|.|.   |.:...| |:.|.|||::         
 Worm   237 RLFPNLKLPSFD-------SSTYRVGHTLAQNLCA---LEMKTEIGAIADFDEVMVADKEMLINY 291

  Fly   378 -------PKGGAVLWSELMDKVRPESRKIKPDGFHSYNFRNVYFLDDQQHEHGWHKDIPK----- 430
                   .:.||:.:|.|:.|..|   ||....||  ......|||    .:|..|.|..     
 Worm   292 VEEAMKPDEVGALSFSHLLVKFEP---KISTMDFH--GVVKPVFLD----RNGPPKTIFNSSAVD 347

  Fly   431 --YMHMLQHV---------------HRAKNYTKPNQYVKCFHDPERVLTLHNHFPLSCLGGVCKS 478
              ..|.::..               :|..:||.|.:.|      ::..:|...:|...:..:.|:
 Worm   348 IIVTHSIRRFIGNETTIRANGSLLHYRHNSYTDPAKEV------QKPYSLFTSYPNLHIKRIQKT 406

  Fly   479 Y------PVDTKDAQLQHYRADCVKTLK-----KSCEEYREHSVEDKTIWKY 519
            .      .:...::...|....|:..:.     :|..||.:..:|..|.|.|
 Worm   407 LRKVFGSSIPPYNSTYLHVLNQCITKIVGEGKCRSTVEYCKQWMEPLTDWVY 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3655NP_001259118.1 Glyco_transf_92 257..527 CDD:279961 65/323 (20%)
F39G3.2NP_504273.2 Glyco_transf_92 167..411 CDD:366762 56/273 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D561250at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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