DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(w[a]) and Sfswap

DIOPT Version :10

Sequence 1:NP_476756.2 Gene:su(w[a]) / 31054 FlyBaseID:FBgn0003638 Length:963 Species:Drosophila melanogaster
Sequence 2:NP_001365844.1 Gene:Sfswap / 231769 MGIID:101760 Length:996 Species:Mus musculus


Alignment Length:1086 Identity:316/1086 - (29%)
Similarity:466/1086 - (42%) Gaps:281/1086 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AGGGSV-----GGILRRTGQGSGTGSTILGNGNSPGALGAGKVSSSLENHRQPPLELLVFGYACK 68
            ||||..     ||:....|.| |||:    .||.                    :||||||||||
Mouse     4 AGGGRAKPERKGGVKEEAGPG-GTGT----GGNR--------------------VELLVFGYACK 43

  Fly    69 IFRDDEKAREMDHGKQLIPWMGDVNLKIDRYDVRGALCELAPHEAPPGGYGNRLEYLSAEEQRAE 133
            :|||||:|...:.|:.|||||||..:.|||||.||.|.:|:.::|....: ||...||.||.|.|
Mouse    44 LFRDDERALAQEQGQHLIPWMGDPKILIDRYDGRGHLHDLSAYDAEYATW-NRDYQLSEEEARVE 107

  Fly   134 QLCEEERYLFLYNNEEELRLRQEEDLKRLQQE-TSGGCFSQVGFQYDGQSAASTSIGGS-----S 192
            .||:|||||.|:.:..|...||||:.|||.:. ...|.:|.|||.|           ||     |
Mouse   108 ALCDEERYLALHTDLLEEEARQEEEYKRLSEALAEDGNYSAVGFTY-----------GSDYYDPS 161

  Fly   193 TATSQLSP----------NSEESELPFVLPYTLMMAPPLDMQLPETMKQHAIIEKTARFIATQGA 247
            ..|.:..|          |.||:|.||:.|  |.::.|.|::||.|.|.|||||:||.|:..|||
Mouse   162 EPTEEEEPSKQREKNEAENLEENEEPFIAP--LGLSVPSDVELPPTAKMHAIIERTANFVCKQGA 224

  Fly   248 QMEILIKAKQANNTQFDFLTQGGHLQPYYRHLLAAIKAAKFPPAPQTPLDQQNTDKEAPSADDHS 312
            |.||::|||||.|:|||||....:|.|||:.:..|:|..::....::..:::.  |..|::|:..
Mouse   225 QFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAESKNEEKK--KSGPTSDNEE 287

  Fly   313 E--EVAGGRRNPNQVVITVPTIKYKPSANCAYTQLISKIKGV----PLQAVLQ--EDESSNPGNS 369
            |  |..|...:|:         .:....:....:|:..:|.|    ||.|:::  :.:||.|...
Mouse   288 EDDEEDGSYLHPS---------LFASKKSSRLEELMKPLKVVDPDHPLAALVRKAQADSSAPAPP 343

  Fly   370 QHSGGTASPALSCRSEGHNSQGGEFTPVLLQYNGSTFTHEEESSNREQQDDNDVNGGEPPQVELL 434
            ...|..|.|          ||        ::|...:.......|.....|........||.:::.
Mouse   344 TADGTPAQP----------SQ--------VEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVA 390

  Fly   435 KNTSALALAQNYSSE--------------------SEEEEDQVQPEKEEEKKPEPVLTFPVPKDS 479
            ...|.|......||.                    :.|....|...........||...|.|.| 
Mouse   391 TYYSTLPAGVTVSSSPGVTTTVPPPPGTTPPPPPTTAEPSSGVTSTTTTTSALAPVAIIPPPPD- 454

  Fly   480 LRHIIDKTATYVIKNGRQFEETLRTKSVDRFSFLLPANEYYPYYLYKVT--------GDVDAASK 536
            ::.:|||.|.||.:||.:||.::|.|:..||.||.|.::|..||.:|..        |...|||.
Mouse   455 IQPVIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWHQYNAYYEFKKQFFLQKEGGGSTQAAST 519

  Fly   537 EEKTRKAAAVAAA-----------LMSKKGLSFGGAAAAVSGSNLDK-------APVSFSIRARD 583
            .|:.....||..:           :....|...|...|..|.|.:|.       ||:||:|:|::
Mouse   520 AEEAPTETAVEESGEAGEDGAPEGMAETGGRGSGKKEAGSSKSTVDGKLVKASFAPISFAIKAKE 584

  Fly   584 -DQCPLQHT---LPQEASDEETS----SNAAGVEHVRP-GMPDSVQRAIKQVETQLLARTAGQKG 639
             |..||:..   |..::.::|.|    .:.:.|.:..| ..|.||  |:::.:.||         
Mouse   585 NDLLPLEKNRVKLDDDSEEDEESRECQESTSSVANPSPAAAPPSV--AVEEKKPQL--------- 638

  Fly   640 NITASPSCSSPQKEQRQAEERVKDKLAQIAREKL--NGMISREKQLQLERKRKALAFLNQIKGEG 702
                    :..:.|.:||:::::|:||..|||||  ....|:|||||.||||||..||..:|   
Mouse   639 --------TQEELEAKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAERKRKAALFLQTLK--- 692

  Fly   703 AIVGSAVPVVGPNP-PESAAGAATADSGDESGDSV--------------RSIPITYFGPDDDDEV 752
                        || ||:..|..     :||...|              |::||....|      
Mouse   693 ------------NPLPEAEVGKL-----EESTFGVEDTGVMPCPLLVGGRTLPILEGKP------ 734

  Fly   753 GEQRPEMRLIGSTQKDEEDDDEE-------DGGDLEKYNLLNDDSTNTFT-SKPVLP-------- 801
             .:||..|.....:::|.:..::       ......||:..:...:.:.: :|..||        
Mouse   735 -PERPSNRCRDPPREEEREKKKKKHKKRSRTRSRSPKYHSSSKPRSRSHSKAKHSLPSAYRTVRR 798

  Fly   802 --PTAA---------PPPAAVLLSDDDDVQLVATTSTRSS-SSRHLKTHRRSRSRSKNVRSSDSS 854
              |:|:         |..:||..:..:..|..:.:|:..| ||...|..:.|||||::.|....|
Mouse   799 SRPSASPGILSVEPCPSSSAVAAAQQESSQAASASSSFDSWSSFEGKPGKPSRSRSRSPRRRAHS 863

  Fly   855 PSSRESSRRRRQKSSRLSREPSSNP--PRKSQHSSTQRKKTPKKRRRSKSRSRSKSIRRSRSISI 917
            |     .|||.::|...:...|.:|  .||...|.:..:|  ||:|||:||:::|:         
Mouse   864 P-----ERRREERSVPTAYRMSGSPGVSRKRTRSRSPHEK--KKKRRSRSRTKAKA--------- 912

  Fly   918 LRNNRRSRSRSPSCRNAEQRRQQDRRRTPTKKSHKRHKRRRRSSSP 963
                 ||:|.||| :.|.||          ..:|..|.   .|.||
Mouse   913 -----RSQSTSPS-KQAAQR----------PSAHSAHS---ASISP 939

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(w[a])NP_476756.2 DRY_EERY 60..180 CDD:462881 63/120 (53%)
SWAP 232..284 CDD:197818 30/51 (59%)
SWAP 481..527 CDD:197818 20/45 (44%)
SfswapNP_001365844.1 DRY_EERY 35..155 CDD:462881 63/131 (48%)
SWAP 209..262 CDD:197818 30/52 (58%)
SWAP 460..507 CDD:197818 20/46 (43%)

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