DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(w[a]) and swp-1

DIOPT Version :9

Sequence 1:NP_476756.2 Gene:su(w[a]) / 31054 FlyBaseID:FBgn0003638 Length:963 Species:Drosophila melanogaster
Sequence 2:NP_001021122.1 Gene:swp-1 / 175795 WormBaseID:WBGene00006359 Length:751 Species:Caenorhabditis elegans


Alignment Length:955 Identity:208/955 - (21%)
Similarity:336/955 - (35%) Gaps:332/955 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ELLVFGYACKIFRDDEKAREMDHGKQLIPWMGDVNLKIDRYDVRGALCEL--------APHEAPP 115
            :|||||||..||.:|.::..:...:..:|.:||...::||||.|..|..:        :|.|..|
 Worm    21 DLLVFGYASTIFPNDYQSEHIAEERHTVPCLGDPENRVDRYDCRLLLPSIDVAIKRNGSPSEQCP 85

  Fly   116 GGYGNRLEYLSAEEQRAEQLCEEERYLFLYNNEEELRLRQEEDLKRLQQETSGGCFSQVGFQYDG 180
                        .|...|.:|||||||.:|.:.:..:.::||:.:|..|..:      :||.|  
 Worm    86 ------------TEAMEEDMCEEERYLDMYKDIQREQEKEEEEKRRNDQRNA------IGFDY-- 130

  Fly   181 QSAASTSIGGSSTATSQLSPNSEESELPFVLPYTLMMAPPLDMQLPETMKQHAIIEKTARFIATQ 245
                     |:....::.|.:.:|   ||..|..:..  |:.::||..||.|.||||||.||...
 Worm   131 ---------GTGKVKARESDSEDE---PFEPPEGIKF--PVGLELPSNMKLHHIIEKTASFIVAN 181

  Fly   246 GAQMEILIKAKQANNT-QFDFLTQGGHLQPYYRHLLAAIKAAKF-PPAPQTPLDQQNTDKEAPSA 308
            |.||||:|||||.||. ||.||.....|.|:|::|...|:..|: |...:.|.....|.:.:.| 
 Worm   182 GTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKYLQKLIREKKYIPDLNKRPKKLTKTSRASTS- 245

  Fly   309 DDHSEEVAGGRRNPNQVVITVPTIKYKPSANCAYTQLISKIKGVPLQAVLQEDESSNPGNSQH-- 371
                                      ||:.:.:...:.:        |...:.|.|:.....|  
 Worm   246 --------------------------KPAISSSLAAIAA--------AHGSDSEDSDSDYELHPS 276

  Fly   372 --SGGTASPALSCRSEGHNSQGGEFTPVLLQYNGSTFTHEEESSNREQQDDNDVNGGEPPQVELL 434
              |||...|.   ..|...:.|....||          ..|:..:...:...|::........|.
 Worm   277 LLSGGAKRPV---TPEKPGAIGPRKKPV----------EPEKPPDFTLKPVGDISQRNDVYAALF 328

  Fly   435 KNTSALALAQNYSSESEEEEDQVQPEKEEEKK------------------------PEPVLTFPV 475
            ||   ||.....::..||.:..|:..|:|::.                        |.|::  |.
 Worm   329 KN---LAHVTRQAAGVEEVKMNVEEAKKEKENDHLDDPEYREWYENFYGRPCPWIGPRPMI--PA 388

  Fly   476 PKDSLRHIIDKTATYVIKNGRQFEETLRTKSVDRFSFLLPANEYYPYYLYKV------------- 527
            ..| |..|::..|.:|.:.|.:.|.:|..:...:..|:.|.:.||.||.:||             
 Worm   389 TPD-LEPILNSYAEHVAQRGLEAEASLAAREDLQLHFMEPKSPYYSYYHHKVRMHQWRMYQPIEQ 452

  Fly   528 ------------------------------TGD-----------VDAASKEEKTRKAAAVAAALM 551
                                          |.:           :|::..:|...:...:....|
 Worm   453 NLSPLVLNSPAPPSAVSSPGPSSLMSLNLSTPEPPLNRRQRRRLLDSSRLDESITEPGVIDPITM 517

  Fly   552 SKKGLSFGGAAAAVSGSNLD--KAPVSFSIR---ARDDQC-PLQHTLPQEASDEETSSNAAGVEH 610
            ..|.:|        :.:|||  |.|:|||:|   .||:.. .....|.:.|...:|::|.:.:..
 Worm   518 IPKSVS--------TPANLDILKTPISFSLRNDEPRDESSFRFDPDLDETAGPSDTTANFSDISG 574

  Fly   611 V-----RPGMPDSVQRAIKQVETQLLARTAGQKGNITASPSCSSPQKEQRQAEERVKDKLAQIAR 670
            :     .|.:|.|.|   .||:.:..||...:|        ....:|.::..||..:.||.:..|
 Worm   575 LFPPPTPPVIPPSTQ---MQVDRKEKARIFMEK--------LLQEKKAKKLQEEEERSKLEEETR 628

  Fly   671 ---EKLNGMISREKQLQLERKRKALAFLNQIKGEGAIVGSAVPVVGPNPPESAAGAATADSGDES 732
               ||::..:|       |||                                 ....:|..:|:
 Worm   629 KKAEKISESLS-------ERK---------------------------------NTGRSDRREEA 653

  Fly   733 GDSVRSIPITYFGPDDDDEVGEQRPEMRLIGSTQKDEEDDDEEDGGDLEKYNLLNDDSTNTFTSK 797
            ....||:          ||:...|                                  .|:..|:
 Worm   654 PKGARSL----------DEIINNR----------------------------------INSLLSE 674

  Fly   798 PVLPPTAAPPPAAVLLSDDDDVQLVATTSTRSSSSRHLKTHRRSRSRSKNVRSSDSSPSSRESSR 862
            ....|.             ::::       |:...|..|.||: ||||:. ||...||..|....
 Worm   675 SGFEPV-------------EEMK-------RTDEDRERKRHRK-RSRSRR-RSRSCSPRDRSREH 717

  Fly   863 RRRQKSSRLSREPSSNPPRKSQHSSTQRKKTPKKRRRSKSRSRSK 907
            ::.:||.|             .|.|..|..:..:.||::||||.:
 Worm   718 KKSRKSGR-------------HHRSRSRSSSRDRHRRNRSRSRDR 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(w[a])NP_476756.2 DRY_EERY 60..180 CDD:286793 39/127 (31%)
SWAP 232..284 CDD:197818 29/52 (56%)
SWAP 481..527 CDD:197818 12/45 (27%)
swp-1NP_001021122.1 DRY_EERY 22..132 CDD:286793 39/138 (28%)
SWAP 168..222 CDD:197818 30/53 (57%)
SWAP 394..444 CDD:197818 14/49 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I6977
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I2754
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60281
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006145
OrthoInspector 1 1.000 - - oto20447
orthoMCL 1 0.900 - - OOG6_105736
Panther 1 1.100 - - LDO PTHR13161
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2829
SonicParanoid 1 1.000 - - X5079
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.090

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