DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(w[a]) and sfswap

DIOPT Version :9

Sequence 1:NP_476756.2 Gene:su(w[a]) / 31054 FlyBaseID:FBgn0003638 Length:963 Species:Drosophila melanogaster
Sequence 2:XP_004910608.2 Gene:sfswap / 100127199 XenbaseID:XB-GENE-489668 Length:922 Species:Xenopus tropicalis


Alignment Length:1000 Identity:289/1000 - (28%)
Similarity:424/1000 - (42%) Gaps:238/1000 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GKVSSSLENHRQPPL-ELLVFGYACKIFRDDEKAREMDHGKQLIPWMGDVNLKIDRYDVRGALCE 107
            ||.|.|..:.:...: ||||||||||:|||||||...:.|:.|||||||..:.|||||.||.|.:
 Frog     7 GKKSRSTSSGKSAAVAELLVFGYACKLFRDDEKALYHEQGRHLIPWMGDSQIMIDRYDGRGHLHD 71

  Fly   108 LAPHEAPPGGYGNRLEYLSAEEQRAEQLCEEERYLFLYNNEEELRLRQEEDLKRLQQE-TSGGCF 171
            |:.::|....: ||...||.||.|.|.||:|||||.|:.:..|...||||:.|||.:. ...|.:
 Frog    72 LSEYDAEHNSW-NRNYNLSEEEARIEALCDEERYLALHTDLLEEEARQEEEYKRLSEALAEDGTY 135

  Fly   172 SQVGFQYDGQSAASTSIGGSSTATSQLSP----------NSEESELPFVLPYTLMMAPPLDMQLP 226
            :.|||||       :.....|..|.:..|          :.|::|.||:.|..|.:  |.|::||
 Frog   136 NTVGFQY-------SDYYDPSQPTEEEEPQKDKDDKELSDPEDNEEPFIAPEGLNV--PSDVELP 191

  Fly   227 ETMKQHAIIEKTARFIATQGAQMEILIKAKQANNTQFDFLTQGGHLQPYYRHLLAAIKAAKFPPA 291
            .|.|.|||||:||.|:..||||.||::|||||.|:|||||....:|.|||:|:..|:|..::  .
 Frog   192 PTAKMHAIIERTANFVCKQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKHIQKAMKEGRY--I 254

  Fly   292 PQTPLDQQNTDKEAPSA------DDHSEEVAGGRRNPNQVVITVPTIKYKPSANCAYTQLISK-I 349
            |||....:...|..||.      ||..::......:|:...          |..|:..:.::| :
 Frog   255 PQTGKTNEEKKKFLPSTEENDDEDDDDDDEGSDYLHPSLFA----------SKRCSRLEELTKPL 309

  Fly   350 KGV----PLQAVLQEDESSNPGNSQHSGGTASPALSCRSEGHNSQGGEFTPVLLQYN-----GST 405
            |.:    ||.|:::  ::.|...:........|.|:.::|    ...|.|.....||     ..|
 Frog   310 KVIDPDHPLAALVR--KAQNERKALQQTDNIGPPLATQTE----SATESTVSSTFYNYYMLPDGT 368

  Fly   406 FTHEEESSNREQQD--DNDVNGGE-------PPQVELLKNTSALALAQNYSSESEEEEDQVQPEK 461
            :....::...|..:  .:.:.|..       .||    .||:......:..:.::..||     .
 Frog   369 YCLASQAPGMEVNNCYSSVIAGAAATAGAIVTPQ----SNTTTPPSEVSCGTNNKGAED-----S 424

  Fly   462 EEEKKPEPVLTFPVPKDSLRHIIDKTATYVIKNGRQFEETLRTKSVDRFSFLLPANEYYPYYLYK 526
            .......||:....|...::.:|||.|.||.:||.:||.::|.|:..||.||.|.::|.|||.:|
 Frog   425 SSASALTPVVAIIPPPPDIQPVIDKLAQYVARNGIKFETSVRAKNDARFDFLQPWHQYNPYYEFK 489

  Fly   527 --------------VTGDVDA--ASKEEKTRKAAAVAAALMSKKGLSFGGAAAA---VSGSNLDK 572
                          .|.:||.  :..|.|:....:...|:..... ||.|.|||   ||...|.|
 Frog   490 KHFFMQKEGLLNVHPTPEVDTNQSFSEVKSESLLSTDPAVNDGND-SFKGDAAASKPVSDGKLMK 553

  Fly   573 ---APVSFSIRARD-DQCPLQHT---LPQEASDEET--------------SSNAAGVEHVRPGMP 616
               ||:||:|:.:: |..||:..   |..::.:||.              ||:::.:....|.|.
 Frog   554 VSFAPISFAIKVKETDLLPLEKNRVKLDDDSEEEEEGDIQKDGHQSKASGSSSSSQILGTGPSMA 618

  Fly   617 DSVQRAIKQVETQLLARTAGQKGNITASPSCSSPQKEQRQAEERVKDKLAQIAREKL--NGMISR 679
            :..:                        |..:..:.|.:||:::::|:||..|||||  ....|:
 Frog   619 EEKR------------------------PQLTPEELEAKQAKQKLEDRLAAAAREKLAQAAKESK 659

  Fly   680 EKQLQLERKRKALAFLNQIKGEGAIVGSAVPVVGPNPPESAAGAATADSGDESGDSVRSIPITYF 744
            |||||.||||||..||..:|               ||.|:..|  ..:....|.:.|.|:..   
 Frog   660 EKQLQAERKRKAALFLQTLK---------------NPLEAELG--RIEESHFSSEVVNSMTC--- 704

  Fly   745 GPDDDDEVGEQRPEMRLIGSTQKDEEDDDEEDGGDLEKYNLLNDDSTNTFTSKPVLPPTAAPPPA 809
                     :..||.|:|.:::.                                  |.....|.
 Frog   705 ---------DLLPEDRIIPTSEY----------------------------------PVTERSPC 726

  Fly   810 AVLLSDDDDVQLVATTSTRSSSSRHLKTHRRSRSRS-KNVRSSDSSPSSRESSRRRRQKSSRLSR 873
            .....::           |....:..|.|.|||||| |:...|.|...|.:..:.....:.|..|
 Frog   727 REFPREE-----------REKKKKKRKKHSRSRSRSPKHHYESKSKSRSHDKVKHSLPTAYRTVR 780

  Fly   874 EPSSNPPRKSQHSSTQRKKTPKKRRRSKSRSRSKSIRRSRSISILRNNRRSRSRSPSCRNAEQRR 938
            ...|..|||...|.      .|:|...|.|....:.|...|..  .:.:|:|||||    .|.| 
 Frog   781 RSRSRSPRKPSQSG------EKRREEEKDRGVPSAYRFGHSPG--NSRKRTRSRSP----PENR- 832

  Fly   939 QQDRRRTPTKKSHKRHKRRRRSSSP 963
                     ||.|.|.|.|.||:||
 Frog   833 ---------KKRHSRPKARSRSNSP 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(w[a])NP_476756.2 DRY_EERY 60..180 CDD:286793 64/120 (53%)
SWAP 232..284 CDD:197818 31/51 (61%)
SWAP 481..527 CDD:197818 22/59 (37%)
sfswapXP_004910608.2 DRY_EERY 24..144 CDD:401629 64/127 (50%)
SWAP 197..250 CDD:197818 31/52 (60%)
SWAP 448..489 CDD:197818 20/40 (50%)
tolA <620..>691 CDD:236545 31/111 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 119 1.000 Domainoid score I5749
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 275 1.000 Inparanoid score I2894
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1414730at2759
OrthoFinder 1 1.000 - - FOG0006145
OrthoInspector 1 1.000 - - oto103505
Panther 1 1.100 - - LDO PTHR13161
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5079
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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