DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc45 and evl-18

DIOPT Version :9

Sequence 1:NP_569880.1 Gene:Cdc45 / 31052 FlyBaseID:FBgn0026143 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_497756.2 Gene:evl-18 / 175481 WormBaseID:WBGene00009372 Length:574 Species:Caenorhabditis elegans


Alignment Length:606 Identity:150/606 - (24%)
Similarity:293/606 - (48%) Gaps:77/606 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVQD-LRNDFYRQLV--GKRILIVVNYDIDAICASRILQALFKYDHMLYTVVPIMGVTGLKRAY 62
            |.::| .|.:||.::.  .|.::::|:.|.||:|.:.||..|.:.|.:.::::.:.|.:.:::.:
 Worm     1 MIIEDNFRQEFYNKIKKGDKSVVLIVSVDTDALCTTMILTHLLRCDDIPFSILAVEGWSSVEKIF 65

  Fly    63 GEHQGDVKYVVLVNCGGCVDIVELLQPSDDVTFFICDSHRPLDVCNIYSDRQVCILGDAS--LEE 125
            .:.|....:.:|:|||....:..|..|...:.|.| |||||..:.|:|.:.|:.:|.:.|  .|.
 Worm    66 ADSQEQKCHYILINCGATRSLTRLQIPPASIAFVI-DSHRPFHIENVYENGQIHLLANPSEMSEL 129

  Fly   126 NIPAFETIFYDSEGEDEDEDESSDTEQQHDDSGAGESDQEDQAPRSRKLSRLERHEQRILKQRAR 190
            .||..|::.    .||.|::|.||             :.|||...|.: .|:|:..::.:|:...
 Worm   130 QIPDLESVI----REDSDDEEDSD-------------EDEDQEYISYE-QRMEKIRRKAIKREEM 176

  Fly   191 RQWESERDRIMFEYTQFSYYGRSAALMVFELAWKLSKDNMDLLWWAIVGITEQLLLGKIESGAYT 255
            :.||.:|..|::.|.:.:::...:.:.:.|:|.::::.:.:.:|:..||:...:....|....||
 Worm   177 QIWERQRRTILWRYYESTWFSSPSCVTLLEMAAEMNRVSAETMWFTAVGLNSAMADKLISIEMYT 241

  Fly   256 -LELEQIQSHVSRLTNKTNDQNTMSASK------ITFENDLHLVLYRHWPVTESMRYSRYSSCQL 313
             :.:::::..|.|...|    |.::..|      |||..:|.|.||.||.:..:|..|.|.|.:.
 Worm   242 QICVDRMRPFVHRFMPK----NIVNQGKVDDLLHITFGRELPLALYSHWDLFSAMMVSEYFSIKT 302

  Fly   314 KLWTLRGEKRLHELLLEMGLPLVHARQTYGAMDLVLRKEFFSMVERLAEKYDIADIVYGTFTLSY 378
            |.||.:|:..:..||.::|:.|...:|.:.|:....|    ::|..:.||.  .|..:.||..:.
 Worm   303 KNWTQKGDVNIRHLLAQLGITLHETKQKFEALPTEQR----NLVVDVLEKE--MDSSFATFFGTL 361

  Fly   379 GYRSRYAAADYVYALLAIMESVKKHKTPEDCF------LEASDALSRQHKQLLS---AGIDQAKL 434
            ||..:.:|.|...|:...:| :.|.:|..:.|      |.:|....||.:..|:   ..|.|..|
 Worm   362 GYCGKLSACDVARAVTLRLE-MPKSETIMNRFRSGQSILRSSITGERQDRLNLNNTFTSICQRTL 425

  Fly   435 LHAAVFRQVQSSLEARQVHSAGSFFYY---------VLQEEHAFFSYPYALGLLARFLLRGHVAT 490
              ...::.|.:::...::...|.::.:         ::...|..::       .|.|::|...:.
 Worm   426 --QVSWKTVAAAINQSEIIPNGPYYLFSCSRSIDEDMVDSRHFLYN-------TAGFMIRAFASM 481

  Fly   491 SRARQASDLPLIASCPLNA-SEGMCLLVGIVPVR---EDS-PRNFFGKAFEQAAQKS-GVALLQD 549
            .:.|...  ||||..||.. |.|..::.|::|:.   ||| .:...|:|||:..:.: .:.::.|
 Worm   482 KKGRTTK--PLIAMFPLTGESAGWLVVTGVMPIATIYEDSLLKTCIGRAFERVKKMTPPLRIVDD 544

  Fly   550 FFEPAVVQLRQSDLTRFLDSL 570
            :|...:::|:..|.|||:|.|
 Worm   545 YFNSDIIRLKSEDRTRFIDFL 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc45NP_569880.1 CDC45 19..571 CDD:367156 144/585 (25%)
evl-18NP_497756.2 CDC45 22..566 CDD:280821 144/585 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161946
Domainoid 1 1.000 153 1.000 Domainoid score I2641
eggNOG 1 0.900 - - E1_KOG2475
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2616
Inparanoid 1 1.050 186 1.000 Inparanoid score I2606
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53772
OrthoDB 1 1.010 - - D1309031at2759
OrthoFinder 1 1.000 - - FOG0004931
OrthoInspector 1 1.000 - - oto20624
orthoMCL 1 0.900 - - OOG6_102930
Panther 1 1.100 - - LDO PTHR10507
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4027
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.840

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