DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11638 and Cabp2

DIOPT Version :10

Sequence 1:NP_569879.1 Gene:CG11638 / 31050 FlyBaseID:FBgn0040351 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_574595.3 Gene:Cabp2 / 499298 RGDID:1563670 Length:221 Species:Rattus norvegicus


Alignment Length:255 Identity:75/255 - (29%)
Similarity:114/255 - (44%) Gaps:52/255 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 AQRNLHGAELEDYDYDGEGEGEREEDGEEEEEEEESYDDYEQSSKPEG-----RRPS-ARTALSV 166
            |:|..|....|.:.:.|...|..........||:|....|.......|     .||| |.|.|: 
  Rat    10 AKRPWHRGSKERWQWPGSPLGGSRPSPGPRAEEQEGTQGYSVLGSLVGPACIFLRPSIAATQLN- 73

  Fly   167 RSRRKTKTRQICYASSDLELGIGDGPNLIDGETLHKRRCISKGQMREFREAFRLFDKDGDGCITK 231
               |:.:..:|                                  .|.:.||:.||:|.||.|..
  Rat    74 ---RELRPEEI----------------------------------EELQVAFQEFDRDRDGYIGY 101

  Fly   232 EELGTVMRSLGQFARVEELQEMLQEIDVDGDGNVSFEEFVDILSNMTYEDKSGLSSADQEERELR 296
            .|||..||:||......||.|:.|:|   ..|.|.||:||:::......:.:.:...    ||||
  Rat   102 RELGACMRTLGYMPTEMELIEISQQI---SGGKVDFEDFVELMGPKLLAETADMIGV----RELR 159

  Fly   297 DAFRVFDKHNRGYITASDLRAVLQC-LGEDLDEEDIEDMIKEVDVDGDGRIDFYEFVHAL 355
            ||||.||.:..|.|:..:|||.|:. |||.|.:.:::::::::|::|||.:||.|||..:
  Rat   160 DAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQDIDLNGDGLVDFEEFVRMM 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11638NP_569879.1 PTZ00184 210..352 CDD:185504 54/142 (38%)
Cabp2XP_574595.3 PTZ00184 75..219 CDD:185504 57/184 (31%)

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