DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11638 and Cabp1

DIOPT Version :9

Sequence 1:NP_569879.1 Gene:CG11638 / 31050 FlyBaseID:FBgn0040351 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001297641.1 Gene:Cabp1 / 29867 MGIID:1352750 Length:350 Species:Mus musculus


Alignment Length:366 Identity:100/366 - (27%)
Similarity:150/366 - (40%) Gaps:91/366 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VSGDEPDEEQASAVVAEGEDQETQNQAMQDDGQPGGEGHHLSSEKQQSTEQCRQRPRKKLTDKQP 71
            ::..|.......|..|.|..:..::.:.:|   ||..|..|......|...|        .|...
Mouse    57 IAKSESKTSLLKAAAASGGSRAPRHSSARD---PGLRGRRLPGPCPGSPPPC--------GDPSS 110

  Fly    72 QRSAANSHPEQADADTDSSSCEGIKVGQRRGTRVSYA--QRNLHGAELEDYDYDGEGEGEREEDG 134
            :|......|..          ||.: |.|||...::.  :..|..|              |..||
Mouse   111 RRPLCRPVPRD----------EGAR-GSRRGLPQAHCRPRETLPPA--------------RGRDG 150

  Fly   135 EEEEEEEESYDDYEQSSKPEGRRPSARTALSVRSRRKTKTRQICYASSDLELGIGDGPNLIDGET 199
            ||                 .|..|:.....|:|||                 |.||.......|.
Mouse   151 EE-----------------RGLAPALGLRGSLRSR-----------------GRGDPAPAGTPEA 181

  Fly   200 ---LHK-----------RRCISKGQMREFREAFRLFDKDGDGCITKEELGTVMRSLGQFARVEEL 250
               ||:           .|.:...::.|.|||||.||||.||.|...:||..||::|......||
Mouse   182 DPFLHRLRPMLSSAFGQDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMEL 246

  Fly   251 QEMLQEIDVDGDGNVSFEEFVDILSNMTYEDKSGLSSADQEERELRDAFRVFDKHNRGYITASDL 315
            .|:.|:|:::..|:|.|::||:::......:.:.:...    :|||||||.||.:..|.|:.|:|
Mouse   247 IELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGV----KELRDAFREFDTNGDGEISTSEL 307

  Fly   316 R-AVLQCLGEDLDEEDIEDMIKEVDVDGDGRIDFYEFVHAL 355
            | |:.:.||..:...|||::|::||::||||:||.|||..:
Mouse   308 REAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11638NP_569879.1 EFh 213..275 CDD:238008 28/61 (46%)
EF-hand_7 215..274 CDD:290234 27/58 (47%)
EFh 294..355 CDD:238008 32/61 (52%)
EF-hand_7 295..355 CDD:290234 31/60 (52%)
Cabp1NP_001297641.1 PTZ00184 201..348 CDD:185504 60/150 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.