DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11638 and F43C9.2

DIOPT Version :9

Sequence 1:NP_569879.1 Gene:CG11638 / 31050 FlyBaseID:FBgn0040351 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_508818.1 Gene:F43C9.2 / 180753 WormBaseID:WBGene00018376 Length:159 Species:Caenorhabditis elegans


Alignment Length:145 Identity:47/145 - (32%)
Similarity:74/145 - (51%) Gaps:8/145 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 EFREAFRLFDKDGDGCITKEELGTVMRSLGQFARVEELQEMLQEIDVDGDGNVSFEEFVDILSNM 277
            :..|.|.|.|.|.||.:::.|:..::|::.......||..:..|:|.|..|.:|.||||:.:.:.
 Worm    23 QLSETFDLLDVDKDGRLSRNEIAALLRTINVEPTRVELDFIFGEMDTDKTGKISKEEFVNYMKSP 87

  Fly   278 TYEDKSGLSSADQEERELRDAFRVFDKHNRGYITASDLRAVLQCLGEDLDEEDIEDMIKEVDVDG 342
            ... ::.|       |||...||.||....|.||..::..:|:...:..|...|.||.|..|::|
 Worm    88 PIH-RTTL-------RELEVQFRKFDSDGDGAITEDEMAEILRRTADLGDRAAISDMFKATDLNG 144

  Fly   343 DGRIDFYEFVHALGE 357
            ||:|.|:|||..:.|
 Worm   145 DGKITFFEFVKMMQE 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11638NP_569879.1 EFh 213..275 CDD:238008 20/61 (33%)
EF-hand_7 215..274 CDD:290234 20/58 (34%)
EFh 294..355 CDD:238008 24/60 (40%)
EF-hand_7 295..355 CDD:290234 23/59 (39%)
F43C9.2NP_508818.1 EF-hand_7 24..84 CDD:290234 20/59 (34%)
EFh 25..85 CDD:298682 20/59 (34%)
EFh 96..158 CDD:238008 24/61 (39%)
EF-hand_7 101..157 CDD:290234 22/55 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.