DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIA-S-2 and SPCC553.11c

DIOPT Version :9

Sequence 1:NP_569877.1 Gene:TfIIA-S-2 / 31048 FlyBaseID:FBgn0040338 Length:107 Species:Drosophila melanogaster
Sequence 2:NP_587763.2 Gene:SPCC553.11c / 2538859 PomBaseID:SPCC553.11c Length:109 Species:Schizosaccharomyces pombe


Alignment Length:102 Identity:38/102 - (37%)
Similarity:66/102 - (64%) Gaps:1/102 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTAERLETFR 67
            |:.||.:::|.:|.|.||:::.:|.|:.::|..||..:|||::.||.:...|.::|.. .|:|:|
pombe     5 YELYRRSSIGISLTDALDDLISQGKISPQLAMKVLFNFDKSMTEALAEKVRSRLTFKG-HLDTYR 68

  Fly    68 CCDNVWTLILKDAEFREDQHSLKVDVVKIVACLGTDN 104
            .||.|||.|:|:..||.|..::..:.::||||...|:
pombe    69 FCDEVWTFIIKNPSFRFDNETVTSNKIRIVACATRDS 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIA-S-2NP_569877.1 TFIIA_gamma_N 2..50 CDD:199901 18/46 (39%)
TOA2 3..103 CDD:227452 37/99 (37%)
TFIIA_gamma_C 53..99 CDD:280847 17/45 (38%)
SPCC553.11cNP_587763.2 TOA2 1..106 CDD:227452 38/102 (37%)
TFIIA_gamma_N 4..52 CDD:199901 18/46 (39%)
TFIIA_gamma_C 54..100 CDD:280847 17/46 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I3268
eggNOG 1 0.900 - - E1_COG5123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 104 1.000 Inparanoid score I1625
OMA 1 1.010 - - QHG55551
OrthoFinder 1 1.000 - - FOG0003136
OrthoInspector 1 1.000 - - otm47205
orthoMCL 1 0.900 - - OOG6_103706
Panther 1 1.100 - - O PTHR10966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2529
TreeFam 1 0.960 - -
1110.830

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