DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIA-S-2 and TfIIA-S

DIOPT Version :10

Sequence 1:NP_569877.1 Gene:TfIIA-S-2 / 31048 FlyBaseID:FBgn0040338 Length:107 Species:Drosophila melanogaster
Sequence 2:XP_313653.4 Gene:TfIIA-S / 1274516 VectorBaseID:AGAMI1_000275 Length:112 Species:Anopheles gambiae


Alignment Length:109 Identity:57/109 - (52%)
Similarity:76/109 - (69%) Gaps:2/109 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTAERLET 65
            |.||.||.||||.|||::|||:::.|.||.::|..||:::||||:.||.:...|.::|.|.:|.|
Mosquito     1 MTYQLYRNTTLGNTLQESLDELIQYGQITPQLAVRVLVQFDKSINAALSNRVKSRVTFKAAKLNT 65

  Fly    66 FRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACLG--TDNGNE 107
            :|.|||||||:|.|.||||.....:||.||||||.|  ...|:|
Mosquito    66 YRFCDNVWTLMLNDVEFREVHEFARVDKVKIVACDGKNVSTGDE 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIA-S-2NP_569877.1 TFIIA_gamma_N 2..50 CDD:199901 26/47 (55%)
TOA2 3..103 CDD:227452 54/101 (53%)
TfIIA-SXP_313653.4 TOA2 3..102 CDD:227452 53/98 (54%)
TFIIA_gamma_N 3..48 CDD:460518 24/44 (55%)

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