DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and Slc22a8

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_112622.1 Gene:Slc22a8 / 83500 RGDID:632286 Length:536 Species:Rattus norvegicus


Alignment Length:515 Identity:113/515 - (21%)
Similarity:195/515 - (37%) Gaps:124/515 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AAVPAAMGTVYETSTMSYILPSAECDL-----KLSLLDKGILNAITYAGMISSAVLWGYLADIKG 110
            |..|...|.:|.::..:.::   |.||     ||    |.:..:|..||::....:.|.|:|..|
  Rat    91 ATEPCLDGWIYNSTRDTIVI---EWDLVCSSNKL----KEMAQSIFMAGILVGGPVIGELSDRFG 148

  Fly   111 RRNLLIVGYAADTICVLGGALSQSRIQLMVFKYLGGFCMSGPFAVLMTYLTELHGRKHRQRIM-- 173
            |:.:|...|........|.|.|.|....|:|::|.|..:||  ..|.|.:..:.......|.:  
  Rat   149 RKPILTWSYLMLAASGSGAAFSPSLPVYMIFRFLCGCSISG--ISLSTVILNVEWVPTSMRAISS 211

  Fly   174 MMVGIMFSIATLTLPGLAMLILPETWNIQIWTLSLTSWQFFVAVTALPSLLSFVLFFFFPESPKF 238
            ..:|..::|....|.|||..| |: |.   |....:|..||:.     ||||    ::.|||.::
  Rat   212 TSIGYCYTIGQFILSGLAYAI-PQ-WR---WLQLTSSAPFFIF-----SLLS----WWVPESIRW 262

  Fly   239 LMSKGRNREALDAFKFMYHLNSRKPKDSFPIKLLANEVIVPVKKHAKDETIPTELKLPTECVEVQ 303
            |:..|:..:||...:.:...|.:                   |:..|..|| .|||...:     
  Rat   263 LVLSGKYSKALKTLQRVATFNGK-------------------KEEGKKLTI-EELKFNLQ----- 302

  Fly   304 DPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWVYLLNFCVLLGQNTMRLWLPQLFASINEYENL 368
                :|...:.::.|.:.|        ..:|: :..:.||:.|.      |....||    |.:|
  Rat   303 ----KDITSAKVKYGLSDL--------FRVSI-LRRVTFCLSLA------WFSTGFA----YYSL 344

  Fly   369 MSGESQSTSICNILEYSVNRTQSQLEAVTRNDPTVECHVIITPSTYTNNLIVAGAGFVAYMLAGF 433
            ..|         :.|:.||                         .|...:|..|....|..:...
  Rat   345 AMG---------VEEFGVN-------------------------IYILQIIFGGVDIPAKFITIL 375

  Fly   434 LVNLVGVKLIMTSGLLIAAGCSIGMYWSSSAASTVALASLFVTMGSISA--TSVISASVSLFPTS 496
            .::.:|.::..:..||:|.|..:.:.:..|....:..|......|.:|.  :.:...:..|:||.
  Rat   376 SLSYLGRRITQSFLLLLAGGAILALIFVPSEMQLLRTALAVFGKGCLSGSFSCLFLYTSELYPTV 440

  Fly   497 LRTMIVSLEMMFGRLGSLLGNIFFPALMGLGCVPPFLMISAF----MLAGCFMAAFLPLK 552
            ||...:.:..::.|:||::.    |.:...|.:.||:....|    :|.|  .|||..|:
  Rat   441 LRQTGMGISNVWARVGSMIA----PLVKITGELQPFIPNVIFGTTALLGG--SAAFFLLE 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 111/510 (22%)
MFS 49..>195 CDD:119392 39/150 (26%)
MFS 419..>550 CDD:119392 30/136 (22%)
Slc22a8NP_112622.1 2A0119 11..503 CDD:273328 113/515 (22%)
MFS 124..492 CDD:119392 102/471 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 515..536
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347178
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.