DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and OCT4

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_188702.2 Gene:OCT4 / 821613 AraportID:AT3G20660 Length:526 Species:Arabidopsis thaliana


Alignment Length:579 Identity:115/579 - (19%)
Similarity:203/579 - (35%) Gaps:154/579 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PPQKEAAADFEAAID------AAGFGMFNILLLVAAVPAAMGTVYETSTMSYI------------ 69
            |.:|||..:....||      ...||.:.:...|....|.....:.|..|.:.            
plant    21 PVKKEAEGEERLCIDEMLQRYCGEFGRWQLKHFVLTCIAWALEAFHTMVMIFADQEPEWRCVGSD 85

  Fly    70 --LPSAECDLKLS-----------------LL--DK---GILNAITYAGMISSAVLWGYLADIK- 109
              :.|..|:|..|                 |:  ||   |::.|:.:||.:..|.::|:|:|.| 
plant    86 CRVGSLNCELDPSSWEWTAGKGSSTVSEWGLICGDKYKVGLVQALFFAGCMIGAGVFGHLSDSKL 150

  Fly   110 GRRNLLIVGYAADTICVLGGALSQSRIQLMVFKYLGGFCMSGPFAVLMTYLTELHGRKHRQRIMM 174
            ||:..|.|....:.|..:..|.|.:....:|.::|.||...|.........||..|...|....|
plant   151 GRKGSLTVVCIINAIFGIATAFSPNYWTYVVLRFLTGFSTGGVGLTAFVLATEPIGPSKRGVAGM 215

  Fly   175 MVGIMFSIATLTLPGLAMLILPETWNIQIWTLSLTSWQFFVAVTALPSLLSFVLFF-FFPESPKF 238
            .....||.....|.|:|.:              ..||:....|::|||||..::.. |..|||::
plant   216 STFYFFSAGIAVLSGIAYV--------------FRSWRELFIVSSLPSLLFLLIVIPFISESPRW 266

  Fly   239 LMSKGRNREALDAFKFMYHLNSRKPKDSFPIKLLANEVIVPVKKHAKDETIPTELKLPTECVEVQ 303
            .:.:|:..||:.....:...|.|.                          ||..:.|..:    .
plant   267 YLVRGKVDEAMKLMHSIAKTNGRH--------------------------IPAGVTLALD----D 301

  Fly   304 DPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWVYL-LNFCVLLGQNTMRLWLPQLFASINEYEN 367
            |.||.:.::::...|  .|:.:...|.:.:.|.:.: ::|.|                       
plant   302 DVENNNGERNTAVEG--SLKDVILSPLMRMRLVISVAISFTV----------------------- 341

  Fly   368 LMSGESQSTSICNILEYSVNRTQSQLEAVTRNDPTVECHVIITPSTYTNNLIVAGAGFVAYMLAG 432
                        :|:.|.::.....|:.                :.|.|..:.|.:...|:.:..
plant   342 ------------SIVYYGLSLNVGNLKT----------------NLYLNVFVNAVSEMPAFAITA 378

  Fly   433 FLVNLVGVK-LIMTSGLLIAAGCSIGM-YWSSSAASTVALAS----LFVTMGSISATSVISASVS 491
            .|::..|.| |.:.:.......|.:|. .|.:....:|.:.|    :|...|:.:...:..|  .
plant   379 VLLDKYGRKPLSIGTQWFSCVFCLVGFSVWGAGPWKSVRMVSGVLGIFGMAGTYNLLFIYIA--E 441

  Fly   492 LFPTSLRTMIVSLEMMFGRLGSLLGNIFFPALMGLGCVPPFLMISAFMLAGCFMAAFLP 550
            ||||.:|...:.......::|::|.    |.::.||...||.:.:...|.|..:|.:||
plant   442 LFPTVVRNAALGCATQAAQMGAILA----PFVVVLGEELPFGVFAVCGLVGGGLAFYLP 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 106/551 (19%)
MFS 49..>195 CDD:119392 42/182 (23%)
MFS 419..>550 CDD:119392 29/136 (21%)
OCT4NP_188702.2 MFS_OCT_plant 90..496 CDD:340936 101/508 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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