DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and Sv2c

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_083486.1 Gene:Sv2c / 75209 MGIID:1922459 Length:727 Species:Mus musculus


Alignment Length:639 Identity:141/639 - (22%)
Similarity:241/639 - (37%) Gaps:163/639 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QKEAAADFEAAIDAAGFGMFNILLLVAAVPAAMGTVYETSTMSYILPSAECDLKLSLLDKGILNA 89
            ::|.|..:|..|...|.|.|...|......|.|....|...:.::|||||.||.:.....|.|.:
Mouse   131 EEELAQQYELIIQECGHGRFQWALFFVLGMALMADGVEVFVVGFVLPSAETDLCIPNSGSGWLGS 195

  Fly    90 ITYAGMISSAVLWGYLADIKGRRNLLIVGYAADTICVLGGALSQSRIQLMVFKYLGGFCMSGPFA 154
            |.|.||:..|..||.|||..||:..|::..:.:.......:..|.....:|.:.|.||.:.|...
Mouse   196 IVYLGMMVGAFFWGGLADKVGRKQSLLICMSVNGFFAFLSSFVQGYGFFLVCRLLSGFGIGGAIP 260

  Fly   155 VLMTYLTELHGRKHRQRIMMMVGIMFSIATLTLPGLAMLILPETWNIQIWTLSL------TSWQF 213
            .:.:|..|:..|:.|...:..:.:.:.|..:....:|..|:|...    |:.|:      .||:.
Mouse   261 TVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYG----WSFSMGSAYQFHSWRV 321

  Fly   214 FVAVTALPSLLSFVLFFFFPESPKFLMSKGRNREALDAFKFMYHLNSR---KPKDSFPIKLLANE 275
            ||.|.|||.:.|.|...|.||||:||:..|::.||....|.::..|.|   :|:..|.:    |:
Mouse   322 FVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTV----NK 382

  Fly   276 VIVPVKKHAKDETIPTELKLPTECVEVQDPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWV-YL 339
            :..|              |...|.:|::....     :..|..|.::|   |:.|   .:|: ::
Mouse   383 IKTP--------------KQIDELIEIESDTG-----TWYRRCFVRIR---TELY---GIWLTFM 422

  Fly   340 LNFCVLLGQNTMRL----------------WLPQLFASI--------------NEYENLMSGESQ 374
            ..|...:.:||::|                |.|.:...:              ::|.|.....:.
Mouse   423 RCFNYPVRENTIKLTIVWFTLSFGYYGLSVWFPDVIKHLQSDEYALLTRNVQKDKYANFSINFTM 487

  Fly   375 STSICNILEY-----------SVNRTQSQLEAVTRNDPTVECHVIITPSTYTNNL---------- 418
            ...|...:||           ||....|..::.|.:|.|       :.:||..|.          
Mouse   488 ENQIHTGMEYENGRFLGVKFKSVTFKDSVFKSCTFDDVT-------SVNTYFKNCTFIDTLFDNT 545

  Fly   419 -------------------------IVAGAGFVAYMLAGFLVNLVGV------------------ 440
                                     |.....:.||.:  :.||.:|.                  
Mouse   546 DFEPYKFIDSEFQNCSFLHNKTGCQITFDDDYSAYWI--YFVNFLGTLAVLPGNIVSALLMDRIG 608

  Fly   441 KLIMTSGLLIAAGCSIGMYW-SSSAASTVALASLF--VTMGSISATSVISASVSLFPTSLRTMIV 502
            :|.|..|.::.:|.|....| .:|.:..:.:..|:  :|:.:.::..|:  :|.|:||..|.   
Mouse   609 RLTMLGGSMVLSGISCFFLWFGTSESMMIGMLCLYNGLTISAWNSLDVV--TVELYPTDRRA--- 668

  Fly   503 SLEMMFGRLGSL------LGNIFFPALMGLGCVPPFLMISAFMLAGCFMAAFLP 550
               ..||.|.:|      |||:.|.:|:.:....|.|:.|..::.|..:...||
Mouse   669 ---TGFGFLNALCKAAAVLGNLIFGSLVSITKAIPILLASTVLVCGGLVGLRLP 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 134/619 (22%)
MFS 49..>195 CDD:119392 37/145 (26%)
MFS 419..>550 CDD:119392 34/157 (22%)
Sv2cNP_083486.1 synapt_SV2 1..727 CDD:130366 141/639 (22%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..128
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8715
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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