DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3690 and sv2a

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_696434.2 Gene:sv2a / 568033 ZFINID:ZDB-GENE-131001-1 Length:733 Species:Danio rerio


Alignment Length:614 Identity:139/614 - (22%)
Similarity:243/614 - (39%) Gaps:113/614 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QKEAAADFEAAIDAAGFGMFNILLLVAAVPAAMGTVYETSTMSYILPSAECDLKLSLLDKGILNA 89
            |:|.|..:|..:...|.|.|...|......|.|....|...:.::|||||.|:.||..:||:|..
Zfish   137 QEELAQQYETILQECGHGRFQWTLYFVLGLALMADGVEIFVVGFVLPSAEKDMCLSEPNKGMLGL 201

  Fly    90 ITYAGMISSAVLWGYLADIKGRRNLLIVGYAADTICVLGGALSQSRIQLMVFKYLGGFCMSGPFA 154
            |.|.||:..|.:||.|||..|||..|::..:.:::.....:..|.....:..:.|.|..:.|...
Zfish   202 IVYLGMMVGAFVWGGLADRIGRRQTLLISLSINSVFAFFSSFVQGYSSFLFCRLLSGVGIGGSIP 266

  Fly   155 VLMTYLTELHGRKHRQRIMMMVGIMFSIATLTLPGLAMLILPE-TWNIQIWT-LSLTSWQFFVAV 217
            ::.:|.:|...::.|...:..:.:.:.|..:....:|..|:|. .|:.|:.: ....||:.||.|
Zfish   267 IVFSYYSEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLV 331

  Fly   218 TALPSLLSFVLFFFFPESPKFLMSKGRNREALDAFKFMYHLNSRKPKDSFPIKLLANEVIVPVKK 282
            .|.||:.:.......||||:|.:..|::.||....|.::..|.|  ...:|.::.:...|..||:
Zfish   332 CAFPSVAAIAALTTMPESPRFYLENGKHDEAWMILKQVHDTNMR--AKGYPERVFSVTTIKTVKQ 394

  Fly   283 HAKDETIPT-----------ELKLPTECVEVQDPENQDSKKSSLRSGFTQLRPLFTK-PYLGLSL 335
              .||.:..           .:||.....:|..            :..|...|.:.: .|:.:::
Zfish   395 --MDELVDMGGEATAWHQRWRIKLTNLFHQVWG------------NFLTVFNPEYRRITYMMMAV 445

  Fly   336 WVYLLNFCVLLGQNTMRLWLPQL--FASINEY---------------------ENLM--SGESQS 375
            |     |.:......:.:|.|.:  :....||                     ||.:  :||..:
Zfish   446 W-----FSMSFSYYGLTVWFPDMIKYLQKQEYSSRTKVFIKEKVEHVTFNFTLENQIHRNGEYFN 505

  Fly   376 TSICNILEYSVNRTQSQLEAVTRNDPTV------ECHVIIT------------------PSTYTN 416
            ....|:...|:....|..|.....|.|.      .|..|.|                  .||:.:
Zfish   506 NKFLNLKMKSMVFEDSLFEECYFEDITSSNTFFRNCTFISTLFYNTDLFKYRLINSKLINSTFLH 570

  Fly   417 NLIVAGAGFV----AYMLAGFLVNLVGVKLIMTSGLLIA------------AGCSI-------GM 458
            |.......|.    |||:  :.|:.:|...::...::.|            ||.|:       .:
Zfish   571 NKEGCMLDFSDENNAYMI--YFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVISCVSCFFL 633

  Fly   459 YWSSSAASTVALASLF--VTMGSISATSVISASVSLFPTSLRTMIVSLEMMFGRLGSLLGNIFFP 521
            .:.:|.::.:||..||  :::.|.:|..|:  :|.|:|:..||..........:|.::||...|.
Zfish   634 SFGNSESAMIALLCLFGGISIASWNALDVL--TVELYPSDKRTTAFGFLNALCKLAAVLGISIFQ 696

  Fly   522 ALMGLGCVPPFLMISAFMLAGCFMAAFLP 550
            :.:|:....|.|..|..:.||.|:|..||
Zfish   697 SFVGITKAVPILFASGALAAGSFLALKLP 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 132/594 (22%)
MFS 49..>195 CDD:119392 37/145 (26%)
MFS 419..>550 CDD:119392 35/155 (23%)
sv2aXP_696434.2 synapt_SV2 1..733 CDD:130366 139/614 (23%)
MFS 162..725 CDD:119392 129/587 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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