DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3690 and svopa

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_005165254.1 Gene:svopa / 559162 ZFINID:ZDB-GENE-060526-336 Length:549 Species:Danio rerio


Alignment Length:548 Identity:106/548 - (19%)
Similarity:216/548 - (39%) Gaps:106/548 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GDPPQKEAAAD------FEAAIDAAGFGMFNILLLVAAVPAAMGTVYETSTMSYILPSAECDLKL 79
            |.|..:|.|..      .|.|::|.|||.|...|.:....:.|....|...:|.:.|...|:..|
Zfish    53 GAPVPREFANPTDDTFMVEDAVEAIGFGTFQWKLSILTGLSWMADAMEMMILSILAPQLHCEWAL 117

  Fly    80 SLLDKGILNAITYAGMISSAVLWGYLADIKGRRNLLIVGYAADTICVLGGALSQSRIQLMVFKYL 144
            ...:..:|.::.:.||:.|:.|||.::|..||:..|.:.........:..|.:.....::..:.|
Zfish   118 PSWEVALLTSVVFIGMMISSSLWGNISDKYGRKTGLKMSVLWTLFYGILSAFAPIYGWILFLRAL 182

  Fly   145 GGFCMSG-PFAVLMTYLTELHGRKHRQRIMMMVGIMFSIATLTLPGLAMLILPETWNIQIWTLSL 208
            .||.:.| |.:|  |...|....:.|...::::.|.:::.|:....||:|::|        ||  
Zfish   183 VGFGIGGAPQSV--TLYAEFLPMRSRATCILLIEIFWALGTVFEVLLAILVMP--------TL-- 235

  Fly   209 TSWQFFVAVTALPSLLSFVLFFFFPESPKFLMSKGRNREALDAFKFMYHLNSRKPKDSFPIKLLA 273
             .|::.:|::.:|..:...|.|:.|||.::.:..|...:||:.                      
Zfish   236 -GWRWLLALSTIPLFIFAFLCFWLPESARYDVLTGNQEKALNT---------------------- 277

  Fly   274 NEVIVPVKKHAKDETIPTELKLPTECVEVQDPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWVY 338
                  :|:.|.:..:|    :|...:.|...|::.           :::.||:..:...::.::
Zfish   278 ------LKRIAAENNVP----MPLGKLIVARQEDRG-----------KIQDLFSPHFRWTTVLLW 321

  Fly   339 LLNFCVLLGQNTMRLWLPQLFASINEYENLMSGESQSTSICNILEYSVNRTQSQLEAVTRNDP-- 401
            .:.|........:.|...:||              |...:|...:.|            :.:|  
Zfish   322 FIWFSNAFSYYGVVLLTTELF--------------QEGGVCGGAKGS------------KMEPGC 360

  Fly   402 TVECHVIITPSTYTNNLIVAGAGFVAYMLAGFLVNLVGVKLIMTSGLLIAAGCSIGMY---WSSS 463
            ::||. .:....|.:.|....:.|...::..:.::.:|.:..|.....:.:.|.:.:|   ..:|
Zfish   361 SLECK-YLNSDDYKDLLWTTLSEFPGLLVTLWAIDRLGRRKTMALCFFVFSLCIVPLYSCVGRTS 424

  Fly   464 AASTVALASLFVTMGSISATSVISASVSLFPTSLRTMIVSLEMMFGRLGSLLGNIFFPALMGLGC 528
            ....:.:|..|:. |...|..|.:..|  :||:.|.:.:.......|:|:|: ..|...:|....
Zfish   425 LTVFIFIARAFIA-GGFQAAYVYTPEV--YPTATRALGLGTSSGMARVGALI-TPFVAQVMLESS 485

  Fly   529 VPPFLMISAFMLAGCFMAAF----LPLK 552
            |  :|.:|.:... |.:||.    ||::
Zfish   486 V--YLTLSVYCCC-CLLAAIASCALPIE 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 95/516 (18%)
MFS 49..>195 CDD:119392 32/146 (22%)
MFS 419..>550 CDD:119392 26/137 (19%)
svopaXP_005165254.1 2A0115 82..482 CDD:273327 87/486 (18%)
MFS 88..508 CDD:119392 92/509 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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