DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and Orct

DIOPT Version :10

Sequence 1:NP_569876.3 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_524479.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster


Alignment Length:534 Identity:105/534 - (19%)
Similarity:183/534 - (34%) Gaps:172/534 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ETST-MSYI------LPSAECDLKLSLLDKGILNA----ITYAGMISSAVLWGYLADIKGRRNLL 115
            ||.| .||:      |.||..:..| :..:.:|:|    :...|::..::::|.::|..||:...
  Fly    98 ETKTCSSYVYDRSKYLNSAVTEWNL-VCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTF 161

  Fly   116 IVGYAADTICVLGGALSQSRIQLMVFKYLGGFCMSGPFAVLMTYLTELHGRKHRQRIMMMVGIMF 180
            ........|..:..|::.......:.:.:.|...||.|.|......|:.|..:|....:.:.:.|
  Fly   162 FASLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFF 226

  Fly   181 SIATLTLPGLAMLILPETWNIQIWTLSLTSWQFFVAVTALPSLLSFVLFFFFPESPKFLMSKGRN 245
            |:..:...|.|..|              ..|::......||.||....::..|||.::|:.|||.
  Fly   227 SVGFMLTAGFAYFI--------------HDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRK 277

  Fly   246 REALDAFKFMYHLNSRKPKDSFPIKLLANEVIVPVKKHAKDETIPTELKLPTECVEVQDPENQDS 310
            .||                            .|.::|.||:    .::::|.|..|....|..:.
  Fly   278 DEA----------------------------FVIIEKAAKE----NKVEVPNEIYEQLVDEVAEK 310

  Fly   311 KKSSLRSGFTQLRPLFTKPYLGLSLWVYLLNFCVLLGQNTMRLWLPQLFASINEYENLMSGESQS 375
            ||                                                     ::.|:....:
  Fly   311 KK-----------------------------------------------------QDEMAASQPA 322

  Fly   376 TSICNILEYSVNRTQSQLEAVTRNDPTVECHVIITPSTYTNNLIVAGAGFVAYMLAG-------- 432
            .::.::|.|...|.::.|...   |..|...|....|..||||  .|...|.:|::|        
  Fly   323 ATVFDLLRYPNLRRKTLLIFF---DWFVNSGVYYGLSWNTNNL--GGNQLVNFMISGAVEIPGYT 382

  Fly   433 ---FLVNLVGVKLIMTSGLLIAAGCSIGMYWSSSAASTVALASLFV------------TMGSISA 482
               |.:|..|.:.|: .|.::.||.|:             ||::||            .:|.::.
  Fly   383 LLLFTLNRWGRRSIL-CGTMMVAGISL-------------LATIFVPSDMNWLIVACAMIGKLAI 433

  Fly   483 TS----VISASVSLFPTSLRTMIVSLEMMFGRLG-------SLLGNIFFPALMGLGCVPPFLMIS 536
            ||    :...|...|||.:|.:.:....|..|:|       .|||.|:.|.        |.::..
  Fly   434 TSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPL--------PLIICG 490

  Fly   537 AFMLAGCFMAAFLP 550
            |..|....::..||
  Fly   491 ALSLTAGLLSLLLP 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_569876.3 synapt_SV2 25..550 CDD:130366 103/532 (19%)
OrctNP_524479.1 2A0119 11..514 CDD:273328 105/534 (20%)

Return to query results.
Submit another query.