DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and F23F12.13

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001033356.1 Gene:F23F12.13 / 3896740 WormBaseID:WBGene00044455 Length:528 Species:Caenorhabditis elegans


Alignment Length:499 Identity:92/499 - (18%)
Similarity:169/499 - (33%) Gaps:148/499 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DKGILNAITYAGMISSAVLWGYLADIKGRRNLLIVGYAADTICVLGGALSQSRIQLMVFKYLGGF 147
            |...:..|.:.|::..|:.:|:|.|..||:.:...|.:...:..:....:.|......|:::.|.
 Worm    95 DAAWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVASGFAPSWEVFAAFRFIVGT 159

  Fly   148 CMSGPFAVLMTYLTELHGRKHRQRIMMMVGIMFSIATLTLPGLAMLILPETWNIQIWTLS---LT 209
            .::....|...|:.|.  .:..||:.:.....:..|.|                 ::||:   ..
 Worm   160 SIASILIVFYAYILEF--IEPEQRVFLRSFFNWGYARL-----------------VFTLACFICG 205

  Fly   210 SWQFFVAVTALPSLLSFVLFFFFPESPKFLMSKGRNREALDAFKFMYHLNSRKPKDSFPIKLLAN 274
            .|:.....|:|.||....:....|||||:..:|.|.|:|..|.|.:..|:.              
 Worm   206 YWRSAAIATSLLSLPILPVLLILPESPKWFNTKKRFRDARAAEKRVAWLSG-------------- 256

  Fly   275 EVIVPVKKHAKDETIPTELKLPTECVEVQDP-ENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWVY 338
               :|   :..||         .:.:|:.:. |.:.:|..:::..||.....:....:| |||..
 Worm   257 ---IP---YVNDE---------DQSIEISEKLEEKSTKIYTMKDLFTSWTIAYRTIVVG-SLWFS 305

  Fly   339 L--------LNFCVLLGQNTMRLWLPQLFASINEYENLMSGESQSTSICNILEYSVN-------- 387
            .        ||...|.|    ..:|.|          .:||  ..|:...|..:.::        
 Worm   306 TSLSAFGSDLNSGNLAG----NFYLSQ----------FVSG--AVTAFAKIFVFLLDTYVPSFDR 354

  Fly   388 RTQSQLEAVTRNDPTVECHVIITPSTYTNNLIVAGAGFVAYMLAGFLVNLVGVKLIMTSGLLIAA 452
            |...|...:.    .:.|:.:|..............|  :..||..::|::||..|         
 Worm   355 RRLHQYPQIA----MILCYCVIMVLMILPESDCGSQG--SRDLAIIIINIIGVSFI--------- 404

  Fly   453 GCSIGMYWSSSAASTVALASLFVTMGSISATSVISASVSLFPTSLRTMIVSLEMMFGRLGSL--- 514
                                      .|:..:....:|..|||.:||:.:....:..|.|:|   
 Worm   405 --------------------------EITWDACYLVAVECFPTKIRTIGIGTCSLLARTGALLAP 443

  Fly   515 ----LGNIFFPALMGLGCVPPFLMISAF----MLAGCFMAAFLP 550
                |.:|:.||        |:.::.:.    :|..|   .|||
 Worm   444 QMAYLSDIYRPA--------PYAVVCSIGTISLLISC---VFLP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 89/496 (18%)
MFS 49..>195 CDD:119392 20/111 (18%)
MFS 419..>550 CDD:119392 25/141 (18%)
F23F12.13NP_001033356.1 MFS 74..476 CDD:391944 90/497 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163045
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.