DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and Slc22a1

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_033228.2 Gene:Slc22a1 / 20517 MGIID:108111 Length:556 Species:Mus musculus


Alignment Length:528 Identity:111/528 - (21%)
Similarity:196/528 - (37%) Gaps:150/528 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PAAMGTVYETSTMSYILPSAECDL------KLSLLDKGILNAITYAGMISSAVLWGYLADIKGRR 112
            |...|.||:|...|.:   .|.:|      |:.|     ..:....|....:::.||:||..||:
Mouse   121 PCEHGWVYDTPGSSIV---TEFNLVCGDAWKVDL-----FQSCVNLGFFLGSLVVGYIADRFGRK 177

  Fly   113 NLLIVGYAADTICVLGGALSQSRIQLMVFKYLGGFCMSGPFAVLMTYLTELHGRKHRQRIMMMVG 177
            ..|:|.....::..:..|::.....:::|:.|.|....|.:....|.:||..|..:|:...::..
Mouse   178 LCLLVTTLVTSLSGVLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQ 242

  Fly   178 IMFSIATLTLPGLAMLILPETWNIQIWTLSLTSWQFFVAVTALPSLLSFVLFFFFPESPKFLMSK 242
            :.|::..:.|.|:|..| |:             |::.....:||:.|..:.::|.||||::|:|:
Mouse   243 VAFTVGLVGLAGVAYAI-PD-------------WRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQ 293

  Fly   243 GRNREALDAFKFMYHLNSRKPKDSFPIKLLANEVIVPVKKHAKDETIPTELKLPTECVEVQDPEN 307
            .|..:|:...:.:...|.:.|                          |.:||:  .|:|    |:
Mouse   294 KRTTQAVRIMEQIAQKNRKVP--------------------------PADLKM--MCLE----ED 326

  Fly   308 QDSKKSSLRSGFTQLRPLFTKP----------YLGLSLWVYLLNFCVLLGQNTMRLWLPQLFASI 362
            ...::|      .....||..|          ||..|..|......:.:|.....|:|...::|:
Mouse   327 ASERRS------PSFADLFRTPSLRKHTLILMYLWFSCAVLYQGLIMHVGATGANLYLDFFYSSL 385

  Fly   363 NEYENLMSGESQSTSICNILEYSVNRTQSQLEAVTRNDPTVECHVIITPSTYTNNLIVAGAGFVA 427
            .|:....           |:..:::|       :.|          |.|...:|  :||||   |
Mouse   386 VEFPAAF-----------IILVTIDR-------IGR----------IYPIAASN--LVAGA---A 417

  Fly   428 YMLAGFLVNLVGVKLIMTSGLLIAAGCSIGMYWSSSAASTVALASLFVTMGSISATSVIS----A 488
            .:|..|:.:                    .::|.:     |.||.|    |.:.||.|:.    .
Mouse   418 CLLMIFIPH--------------------ELHWLN-----VTLACL----GRMGATIVLQMVCLV 453

  Fly   489 SVSLFPTSLRTMIVSLEMMFGRLGSLLGNIFFP----ALMGLGCVPPFLMISAFMLAGCFMAAFL 549
            :..|:||.:|    :|.||.......||.||.|    .||.:....|.::.....|:...:...|
Mouse   454 NAELYPTFIR----NLGMMVCSALCDLGGIFTPFMVFRLMEVWQALPLILFGVLGLSAGAVTLLL 514

  Fly   550 PLKNKAAL 557
            |.....||
Mouse   515 PETKGVAL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 107/518 (21%)
MFS 49..>195 CDD:119392 33/146 (23%)
MFS 419..>550 CDD:119392 32/138 (23%)
Slc22a1NP_033228.2 2A0119 12..525 CDD:273328 111/528 (21%)
MFS 125..515 CDD:119392 106/515 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843729
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.