DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and B0252.3

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001021888.1 Gene:B0252.3 / 174130 WormBaseID:WBGene00015088 Length:484 Species:Caenorhabditis elegans


Alignment Length:459 Identity:92/459 - (20%)
Similarity:167/459 - (36%) Gaps:131/459 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 LADIKGRRNLLIVGYAADTICVLGGALSQSRIQLMVF---KYLGGFCMSGPFAVLMTYLTELHGR 166
            |||..||   |.|..|...:..:||.:|.....:|:|   :.:.|...:.  |.|..::......
 Worm   114 LADHYGR---LPVFVATVLLMAVGGMISAFSTSIMMFCIMRMIHGIFYTA--AGLAGWVLGYENT 173

  Fly   167 KHRQRIMMMV--GIMFSIATLTLPGLAMLILPETWNIQIWTLSLTSWQFFVAVTALPSL-LSFVL 228
            ..|.|....|  |:|:.:....| ||...|||:             |::.:...::|:: ::.::
 Worm   174 PLRLRFFTSVYFGVMWVVGACFL-GLLAYILPD-------------WRYLMFCISVPNIFVALLI 224

  Fly   229 FFFFPESPKFLMSKGRNREALDAF--KFMYHLNSRKPKDSFPIKLLANEVIVPVKKHAKDETIPT 291
            :...|||..||:|..:| |.::|:  |.      |.||..    :.|::::              
 Worm   225 YMTVPESLHFLVSSQQN-EKIEAWLEKI------RGPKGD----ISASDIV-------------- 264

  Fly   292 ELKLPTECVEVQDPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWVYLLNFCVLLGQNTMRLWLP 356
                          |::|...||.::             |...:|.:.: |.|.:...|. :|:.
 Worm   265 --------------EDRDENGSSFKT-------------LCREMWKHKM-FIVYVLVMTY-IWIV 300

  Fly   357 QLFASINEYENLMSGESQSTSICNILEYSVNRTQSQLEAVTRNDPTVECHVIITPSTYTNNLIVA 421
            ..|...                 .:..||.|                     :..:.|.|.::::
 Worm   301 DTFIYF-----------------GLAFYSTN---------------------LAGNLYLNFVLMS 327

  Fly   422 GAGFVAYMLAGFLVNLVGVKLIMTSGLLIAAGCS-IGMYWSSSAASTVALASLFVTMG----SIS 481
            .....||:.:...:|..|.| ::.||..|.||.| :|:..||.|...     .|..:|    |.|
 Worm   328 LVEAPAYIFSPIFMNKYGRK-VLISGTHIIAGLSFLGIVLSSEAWHI-----HFWLLGKFAISCS 386

  Fly   482 ATSVISASVSLFPTSLRTMIVSLEMMFGRLGSLLGNIFFPALMGLGCVPPFLMISAFMLAGCFMA 546
            ..|:...:..:|||..|...:.......|.|.:| :.:...|..:..:.|.:.:|...::|..:.
 Worm   387 FMSIYMFASEIFPTDGRNKCIGFCETLSRFGGML-SPYLSHLTAVHALAPAITLSLIAVSGGLLT 450

  Fly   547 AFLP 550
            ..||
 Worm   451 LILP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 90/456 (20%)
MFS 49..>195 CDD:119392 24/94 (26%)
MFS 419..>550 CDD:119392 31/135 (23%)
B0252.3NP_001021888.1 MFS 87..454 CDD:119392 90/457 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163022
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.