DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and UST4r

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_599206.2 Gene:UST4r / 171397 RGDID:620976 Length:552 Species:Rattus norvegicus


Alignment Length:610 Identity:114/610 - (18%)
Similarity:204/610 - (33%) Gaps:204/610 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GFGMFNILLLV----AAVPAAMGTVYETSTMSYILPSAEC------DLKLSLLDKGILNAITYAG 94
            |.|.|.||.:|    .:|......:.|..|.:  :||..|      ::.:|..|..|||......
  Rat    12 GLGRFQILQMVFVVFTSVIVVPHIIIENFTAA--IPSHRCWVPILDNVTVSDNDSRILNQDKLLK 74

  Fly    95 MISSAVLWGYLADIKGRR------NLL-----------------IVGYAAD-------------T 123
            :  |..|..:|...|.||      :||                 :.|:..|             .
  Rat    75 I--SIPLDSHLRLDKCRRFAQPQWHLLDLNDTFSSITEPDTEPCVDGWVYDRSNFHSTTVTEWNL 137

  Fly   124 ICVLGGALSQSRIQLMVFKYLGGFCMSGPFAVLMTYLTELHGRKHRQRIMMMVGIMFSIATLTLP 188
            :|......|.:::..|:..::||        ::...|::..|||    .::...::....|.|..
  Rat   138 VCESQALNSVTKLSFMIGAFIGG--------IVNGLLSDRFGRK----FILKYALLQMAITETCA 190

  Fly   189 GLA--------------MLILPETWNIQIWTLSLTSWQFFVAVTALPS----------------- 222
            |.|              |.:.|.|.||.:.....||.:|...||.|.|                 
  Rat   191 GFAPNLFIYCSLRFLAGMSLEPITVNINLLMFEWTSPKFLTMVTVLGSCAGSFGGMILAGLAFQF 255

  Fly   223 --------LLSFVLFFF------FPESPKFLMSKGRNREALDAFKFMYHLNS-RKPKDSFPIKLL 272
                    .:|..:|||      ..||.::|:...:.::.|...|.:.|:|. :|..|:..:   
  Rat   256 QNWHHLQLAMSVPIFFFLILTRWLSESARWLIVINKPQKGLKELKKVAHINGMKKSGDNITM--- 317

  Fly   273 ANEVIVPVKKHAKDETIPTELKLPTECVEVQDPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWV 337
                          |.:.|.:|...|..::: |..:|               ||..|.|...  :
  Rat   318 --------------EVVRTSMKKELEAAKMR-PSPRD---------------LFHTPILRKQ--I 350

  Fly   338 YLLNFCVLLGQNTMRLWLPQLFASINEYENLMSGESQSTSICNILEYSVNRTQSQLEAVTRNDPT 402
            |:|:|..||                    .::||...:.               .|:.::.|...
  Rat   351 YILSFIRLL--------------------FILSGVGVAI---------------HLQHLSNNIEL 380

  Fly   403 VECHVIITPSTYTNNLIVAGAGFVAYMLAGFLVNLVGVKLIMTSGLLIAAGCSI-GMYWSSSAAS 466
            ::             ::::.:..:..::..|::|.:| :.|....::...|.|| ...::.....
  Rat   381 LQ-------------ILISVSSILFSVIGHFVLNHIG-RRITQMVIMFLRGISILTAIFAPQEME 431

  Fly   467 TVALASLFVTMGSISATSVISASV---SLFPTSLRTMIVSLEMMFGRLGSLLGNIFFPALMGLGC 528
            |:......:..| ::|.|..:.|:   .|.||:||.....:..|||.:|..|.    |..|.|..
  Rat   432 TLRFIMAMMAEG-LAALSYAANSLHANELLPTTLRATARGVIGMFGNIGFFLA----PLCMMLAS 491

  Fly   529 VP---PFLMISAFMLAGCFMAAFLP 550
            ..   |::....|.:...|:...||
  Rat   492 YSPNLPWIFYGGFAILSGFIVLLLP 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 111/605 (18%)
MFS 49..>195 CDD:119392 36/205 (18%)
MFS 419..>550 CDD:119392 28/137 (20%)
UST4rNP_599206.2 MFS_OAT 109..516 CDD:340932 87/507 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347167
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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