DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and SVOPL

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001132928.1 Gene:SVOPL / 136306 HGNCID:27034 Length:492 Species:Homo sapiens


Alignment Length:572 Identity:113/572 - (19%)
Similarity:214/572 - (37%) Gaps:140/572 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TAEHQIGDPPQKEAAADFEAAIDAAGFGMFNILLLVAAVPAAMGTVYETSTMSYILPSAECDLKL 79
            |||.|:.:|    .....|.|::..|||.|:|.|.:......:....|...::.:.|...|:.:|
Human    21 TAEPQVKEP----KTFTVEDAVETIGFGRFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQL 81

  Fly    80 SLLDKGILNAITYAGMISSAVLWGYLADIKGRRNLLIVGYAADTICVLGGALSQSRIQLMVFKYL 144
            ......::..:.:.|.:..::|:|.|||..||..:|::.:.......|..:.:.|.|..:..:.:
Human    82 ENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTM 146

  Fly   145 GGFCMSGPFAVLMTYLTELHGRKHRQRIMMMVGIMFSIATLTLPGLAMLILPETWNIQIWTLSLT 209
            .|..:||....|: ..||....|:|..::.:..:.:...:|.:.|||.:|:|           ..
Human   147 VGCGVSGHSQGLI-IKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIP-----------TI 199

  Fly   210 SWQFFVAVTALPSLLSFVLFFFFPESPKFLMSKGRNREALDAFKFMYHLNSRKPKDSFPIKLLAN 274
            .|::.:.|.::|.::..|.|.|.|||.:|.:|.|..|.||...:.:..:|               
Human   200 GWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMN--------------- 249

  Fly   275 EVIVPVKKHAKDETIPTELKLPTECVEVQDPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWVYL 339
                        .::..|.||....:|             .|..|..   |....||        
Human   250 ------------RSVMPEGKLVEPVLE-------------KRGRFAD---LLDAKYL-------- 278

  Fly   340 LNFCVLLGQNTMRLWLPQLFASINEYENLM--------------------------SGESQSTSI 378
                    :.|:::|:..|..|...|..::                          ||||||...
Human   279 --------RTTLQIWVIWLGISFAYYGVILASAELLERDLVCGSKSDSAVVVTGGDSGESQSPCY 335

  Fly   379 CNILEYSVNRTQSQLEAVTRNDPTVECHVIITPSTYTNNLIVAGAGFVAYMLAGFL-VNLVGVKL 442
            |:                           :..||.| ..:|::..|.:|......| :|.:|.:|
Human   336 CH---------------------------MFAPSDY-RTMIISTIGEIALNPLNILGINFLGRRL 372

  Fly   443 IMTSGLLIAAGCSIGMYWSSSAASTVA--LASLFVTMGSISA--TSVISASVSLFPTSLRTMIVS 503
                .|.|..||:...:...:..::.|  :..||:....::|  .:|...:..::||::|.:.:.
Human   373 ----SLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMG 433

  Fly   504 LEMMFGRLGSLLGNIFFPALMGLGCVPPFLMISAFMLAGCFMAAF-LPLKNK 554
            ......|:|:::.......||....:....:.|:..:. |.::|| ||::.|
Human   434 TSGSLCRIGAMVAPFISQVLMSASILGALCLFSSVCVV-CAISAFTLPIETK 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 101/538 (19%)
MFS 49..>195 CDD:119392 28/145 (19%)
MFS 419..>550 CDD:119392 27/136 (20%)
SVOPLNP_001132928.1 2A0115 34..454 CDD:273327 99/522 (19%)
MFS 51..480 CDD:119392 97/532 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153560
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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