DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3690 and str-176

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001294210.1 Gene:str-176 / 13197055 WormBaseID:WBGene00006220 Length:540 Species:Caenorhabditis elegans


Alignment Length:563 Identity:118/563 - (20%)
Similarity:206/563 - (36%) Gaps:163/563 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ILLLVAAVPAAMG------------TVYETST------MSYILPSAECDLKLSLLD-KGILNAIT 91
            :::...|.||.:|            ..:...|      :.|...|.:.:......| |.:.|.||
 Worm    80 VMVFAGANPAVIGCGGTPLNGCHELAAFRNETNLCEPDLRYQFKSVQVEFNYICEDAKKVKNTIT 144

  Fly    92 YA--GMISSAVLWGYLADIKGRRNLLIVGYAADTICVLGGALSQSRIQLMVFKYLGGFCMSGPFA 154
            ..  |::..|.::|.::|..|||..|::....:.:.....|.|......||::.|.|....|...
 Worm   145 VQTFGVLVGAAIFGQVSDTFGRRKALLISTLGNGLFNWITAYSPDLFYFMVWRTLAGVFTGGVTV 209

  Fly   155 VLMTYLTELHGRKHRQRIMMMVGIMFSIATLTLPGLAMLILPETWNIQIW-TLSLTSWQFFVAVT 218
            |.|.::.|...||  .|:.:...|.:|...:..|.:|       |..|.| |:|:        |.
 Worm   210 VQMVFMVENIPRK--DRMWIQNSITWSPNLILFPFVA-------WLCQDWRTMSV--------VI 257

  Fly   219 ALPSLLSFVLFFFFPESPKFLMSKGRNREALDAFKFMYHLNSRKPKDSFPIKLLANEVIVPVKKH 283
            |..|:.:|:......|||::|:.|||..||            ||.             ::.::|.
 Worm   258 AASSIATFLACLILEESPRWLIQKGRIEEA------------RKS-------------LIRIRKT 297

  Fly   284 AK--DETIPTELKLPTECVEVQDPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWVYLLNFCVLL 346
            .|  |||...:|   .|.:.|:..::..|.|.:.:..|..|                   ||.  
 Worm   298 DKLYDETFEKQL---DEVLHVEAEKHARSSKKAKKYTFIHL-------------------FCT-- 338

  Fly   347 GQNTMRLWLPQLFASINEYENLMSGESQSTSICNILEYSVNRTQSQLEAVTRNDPTVECHVIITP 411
                   |     ..|.:....::|.:.:|.|...|.|::.:                    ::.
 Worm   339 -------W-----KMIAQSLTFITGITCTTFIVYSLMYNMEK--------------------LSG 371

  Fly   412 STYTNNLIVAGAG----FVAYMLAGFLVNLVGVKLIMTSGLLIAAGCSIGMYWSSSAASTVALAS 472
            |.|. ||.:.||.    .:|..:|.:.:...|.|:|.          .|.|..:..|...:|:..
 Worm   372 SLYW-NLAIMGASRWIINIAVSIADYKLPWFGRKMIN----------QIAMICTLFALLMIAVYL 425

  Fly   473 LF------VTMGSISATSVISASV--------SLFPTSLRTMIVSLEMMFGRLGSLLG-NIFF-- 520
            .|      :.:|:::|.|:.|...        .|:||::|.:.||......|:||:.. .:|:  
 Worm   426 YFGYNGQLIAIGTVAAVSMCSQLFIAKYMMVNELYPTAVRNLAVSAVSTMSRIGSMFSPQLFYLS 490

  Fly   521 ------PALMGLGC-VPPFLMISAFM--LAGCFMAAFLPLKNK 554
                  |..:...| :..|:::|.|:  ..|..:...||.|:|
 Worm   491 DYAEWIPYAVLFSCQLYDFIVLSLFLPETKGVILENHLPPKHK 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 114/556 (21%)
MFS 49..>195 CDD:119392 37/166 (22%)
MFS 419..>550 CDD:119392 32/160 (20%)
str-176NP_001294210.1 2A0119 13..527 CDD:273328 114/555 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162903
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.