DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3690 and Sv2b

DIOPT Version :9

Sequence 1:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_476555.1 Gene:Sv2b / 117556 RGDID:619716 Length:683 Species:Rattus norvegicus


Alignment Length:616 Identity:140/616 - (22%)
Similarity:250/616 - (40%) Gaps:118/616 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QKEAAADFEAAIDAAGFGMFNILLLVAAVPAAMGTVYETSTMSYILPSAECDLKLSLLDKGILNA 89
            :::.|..:|..||..|.|.|...|....|.|.|....|...:|:.|||||.|:.||...||:|..
  Rat    88 EEQLAHQYETIIDECGHGRFQWTLFFVLVLALMADGVEVFVVSFALPSAEKDMCLSSSKKGMLGL 152

  Fly    90 ITYAGMISSAVLWGYLADIKGRRNLLIVGYAADTICVLGGALSQSRIQLMVFKYLGGFCMSGPFA 154
            |.|.||::.|.:.|.|||..||:.:|.:..|.:.......:..|.....:..:.:.|..:.|...
  Rat   153 IVYLGMMAGAFILGGLADKLGRKKVLSMSLAINASFASLSSFVQGYGAFLFCRLISGIGIGGSLP 217

  Fly   155 VLMTYLTELHGRKHRQRIMMMVGIMFSIATLTLPGLAMLILPE-TWNIQIWT-LSLTSWQFFVAV 217
            ::..|.:|...|:.|...:..:||.:....:....:|..|:|. .|...:.| ....||:.||.|
  Rat   218 IVFAYFSEFLSREKRGEHLSWLGIFWMTGGIYASAMAWSIIPHYGWGFSMGTNYHFHSWRVFVIV 282

  Fly   218 TALPSLLSFVLFFFFPESPKFLMSKGRNREALDAFKFMYHLNSR---KPKDSFPIKLLANEVIVP 279
            .|||:.:|.|...|.||||:||:..|::.||....|.::..|.|   .|:..|.:          
  Rat   283 CALPATVSMVALKFMPESPRFLLEMGKHDEAWMILKQVHDTNMRAKGTPEKVFTV---------- 337

  Fly   280 VKKHAKDETIPTELKLPTECVEVQDPENQDSKKSSLRSGFTQLRPLFTK-----------PYLGL 333
              .|.|   .|.::   .|.:|:     |.|..:..:....:...:|.:           ||...
  Rat   338 --SHIK---TPKQM---DEFIEI-----QSSTGTWYQRWLVRFMTIFKQVWDNALYCVMGPYRMN 389

  Fly   334 SLWVYLLNFCVLLGQNTMRLWLPQL--FASINEYENLMS---GESQSTSICNI-LEYSVNR---- 388
            :|.:.::.|.:.|....:.:|.|.:  :....||::.|.   ||....:..|. :|..:::    
  Rat   390 TLILAVVWFTMALSYYGLTVWFPDMIRYFQDEEYKSKMKVFFGEHVHGATINFTMENQIHQHGKL 454

  Fly   389 --------------------TQSQLEAVTRNDP-----TVE------------------------ 404
                                .:...|.||..|.     |:|                        
  Rat   455 VNDKFIKMYFKHVLFEDTFFDKCYFEDVTSTDTYFKNCTIESTTFYNTDLYKHKFIDCRFINSTF 519

  Fly   405 ------CHVIITPSTYTNNLIVAGAGFVAYM-------LAGFLVNLVGVKLIMTSGLLIAAGCSI 456
                  ||:.....   |:.::....|:..:       ::..|::.:|...::...:||:|.|..
  Rat   520 LEQKEGCHMDFEED---NDFLIYLVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSMLISAVCCF 581

  Fly   457 GMYWSSSAASTVALASLF--VTMGSISATSVISASVSLFPTSLRTMIVSLEMMFGRLGSLLGNIF 519
            .:::.:|.::.:....||  .::.:.:|..||  :|.|:||:.|.....:.....:||::|||..
  Rat   582 FLFFGNSESAMIGWQCLFCGTSIAAWNALDVI--TVELYPTNQRATAFGILNGLCKLGAILGNTI 644

  Fly   520 FPALMGLGCVPPFLMISAFMLAGCFMAAFLP 550
            |.:.:|:..|.|.|:.:|.::.|..:|..||
  Rat   645 FASFVGITKVVPILLAAASLVGGGLVALRLP 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3690NP_001284764.1 SP 42..549 CDD:273317 133/596 (22%)
MFS 49..>195 CDD:119392 39/145 (27%)
MFS 419..>550 CDD:119392 31/139 (22%)
Sv2bNP_476555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..72
synapt_SV2 8..683 CDD:130366 140/616 (23%)
MFS 112..>305 CDD:119392 59/192 (31%)
MFS 534..>675 CDD:119392 32/142 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8952
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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