DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3699 and RDH8

DIOPT Version :10

Sequence 1:NP_569875.2 Gene:CG3699 / 31046 FlyBaseID:FBgn0040349 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_056540.3 Gene:RDH8 / 50700 HGNCID:14423 Length:311 Species:Homo sapiens


Alignment Length:209 Identity:65/209 - (31%)
Similarity:102/209 - (48%) Gaps:21/209 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLSNKVVIVTGASSGIGAAIAQVLAREG-------ATLALVGRNVANLEATKKSLKGTQAEIVV 58
            |:.:.:.|:::|.|||||..:|..||.:.       ||:..:|:. ..|||......|....:..
Human     1 MAAAPRTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLGKK-ETLEAAAGEALGQTLTVAQ 64

  Fly    59 ADVTKDADAIVQQTLAKFGRIDVLVNNAGILGKGGLIDLDIEEFDAVLNTNLRGVILLTKAVLPH 123
            .||..| :::.|......|.:||||||||:...|.|..|.:.....|.:||..|.:.|.|||||.
Human    65 LDVCSD-ESVAQCLSCIQGEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPG 128

  Fly   124 LLKTK-GAVVNVSSCAGIRPFAGALSYGVSKAALDQFTKIVALEMAPQGVRVNSVNPGFVVTNIH 187
            :.:.: |.:|.:||..|::.......|..||.||:.|.:.:|:::....:.::.|.||.|||   
Human   129 MKRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFNIFISLVEPGPVVT--- 190

  Fly   188 RNIGIVDEEYNGML 201
                    |:.|.|
Human   191 --------EFEGKL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3699NP_569875.2 Rossmann-fold NAD(P)(+)-binding proteins 3..248 CDD:473865 64/207 (31%)
RDH8NP_056540.3 type1_17beta-HSD-like_SDR_c 6..262 CDD:187666 64/204 (31%)

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