DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3699 and stdh-1

DIOPT Version :9

Sequence 1:NP_569875.2 Gene:CG3699 / 31046 FlyBaseID:FBgn0040349 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_506449.1 Gene:stdh-1 / 182291 WormBaseID:WBGene00007363 Length:314 Species:Caenorhabditis elegans


Alignment Length:236 Identity:62/236 - (26%)
Similarity:107/236 - (45%) Gaps:31/236 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVTGASSGIGAAIAQVLAREGATLALVGRNVANLEATKKSLKGTQAEIVVA----DVTKDADAIV 69
            :||||:.|||.:.:..||:.|..:.:|.|..:.||.|||.:.....:|.|.    |.|..:.:..
 Worm    51 VVTGATDGIGKSYSFELAKRGFNVYIVSRTQSKLEHTKKEILEVHPDIEVRFATFDFTNPSVSDY 115

  Fly    70 QQTLAKFGR--IDVLVNNAG-------ILGK--GGLIDLDIEEFDAVLNTNLRGVI---LLTKAV 120
            ::.|:|...  |.:|:||.|       :|.|  ||:        |::.|..:...:   ||:..:
 Worm   116 EKLLSKLNEVSIGILINNVGMFFDYPEMLHKINGGI--------DSIANVTIINTLPATLLSAGI 172

  Fly   121 LPHLLKTK-GAVVNVSSCAGIRPFAGALSYGVSKAALDQFTKIVALEMAPQGVRVNSVNPGFVVT 184
            ||.::..| |.:||:.|.||:...|....|..:|..::..|..:..|...||:...::.|..|.|
 Worm   173 LPQMVPRKAGIIVNIGSVAGLATMAEWSVYSATKKYVEWITGCLQKEYGHQGIIFQAITPAMVAT 237

  Fly   185 NI--HRNIGIVDEEYNGMLQRAINS--HPMGRVGDVTEVAE 221
            .:  :.|......:.:...:.|:|:  |.....|.:|...|
 Worm   238 KMAGNPNTSFFTPDSDTFAKSALNTIGHASQTTGYITHQIE 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3699NP_569875.2 fabG 1..244 CDD:235546 62/236 (26%)
NADB_Rossmann 3..248 CDD:304358 62/236 (26%)
stdh-1NP_506449.1 17beta-HSD1_like_SDR_c 47..289 CDD:187614 62/236 (26%)
adh_short 49..242 CDD:278532 55/198 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D913128at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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