DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3703 and Sgsm3

DIOPT Version :9

Sequence 1:NP_569874.1 Gene:CG3703 / 31045 FlyBaseID:FBgn0040348 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_942082.2 Gene:Sgsm3 / 362963 RGDID:735113 Length:763 Species:Rattus norvegicus


Alignment Length:820 Identity:152/820 - (18%)
Similarity:271/820 - (33%) Gaps:278/820 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EEVEVEQEQQELLSER---WSPLGANYDDANSASSGVDCELEPGLEKSEARRGSTGSELARLRSI 95
            :|:..:..|:|..||.   :...|...|...|         |||.           |::|....:
  Rat    37 QEILAKSSQKEDSSEPEICYDEFGFRVDKEGS---------EPGC-----------SQMAGTPLV 81

  Fly    96 EE-EQELLTSSLLALTSHFAHVQLRVRQI-VEAPAEERDQLLRDLEDFAFQGIP----------- 147
            |: .|.|...:.|..|.:.....|...:| |..|..|:      |......|||           
  Rat    82 EDPPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEK------LRSLVLAGIPHGMRPQLWMRL 140

  Fly   148 -DAVQSKE------------SHPDK--PASDGEKD-----------HGPDSQLIQQLKSQLTEL- 185
             .|:|.|:            |..|:  .|...|||           ...:|..:.:|:..|..| 
  Rat   141 SGALQKKKNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFANVNSIGVPRLRRVLRALA 205

  Fly   186 ---EQIAYEAGEPGILPQHVLL---EKQKF-----ILDEL-------RAKLNLQVEQHELPALST 232
               .:|.|..| .|::...:||   |:..|     |:::|       ...|.:|.:|..|..|..
  Rat   206 WLYPEIGYCQG-TGMVAACLLLFLEEEDAFWMMCAIIEDLLPASYFSTTLLGVQTDQRVLRHLIV 269

  Fly   233 EQL--------RHQVDNAI-----------------------------GEFV------GPLKMKE 254
            :.|        .|.::.::                             |..|      |.|::||
  Rat   270 QYLPRLDKLLQEHDIELSLITLHWFLTAFASVVHIRLLLRIWDLFFYEGSLVLFQTTLGMLRLKE 334

  Fly   255 QLVAQLKTQ------ITDLERFIAFLQCDAIEGSVGDRLKLLSGAYNSYAAKQTARSSQASYVAT 313
            :.:.|.:..      ::|:.     .|.|..|..:|:.:: |:|:....|. :|.|....:|:..
  Rat   335 EELIQSENSASIFNTLSDIP-----AQMDDAELLLGEAMQ-LAGSLTDVAV-ETQRRKHLAYLIA 392

  Fly   314 NAPAT--TATTPPSSGLGAHSSGESLHSKAHGLLDKASVLMQMFASTHLVKPRTHDEFQQNSLKK 376
            :...|  |:||...|.:....:...          |:.:...:|....|      :..:..::|:
  Rat   393 DQGQTLGTSTTTSLSQVVRRRTQRR----------KSGITSLLFGEDDL------EALKAKNIKQ 441

  Fly   377 THKGNHWGDLRAQLEVDIQE-VAALAATLSCDREKLANIK------------------RALRKQQ 422
            |           :|..|::| :..:|....|...|..:::                  ..||..:
  Rat   442 T-----------ELVADLREAILRVARHFQCTDPKNCSVELTPDYSMESHQRDHENYVACLRSHR 495

  Fly   423 QQAES-TEFSDTGNPVIN-SQNGALTLPPRCRRAVPTGHELAPYASGGAISSDSDEDISYSNFEW 485
            ::|:: .:|....:..:. .:|..:|                       |.|..||..      |
  Rat   496 RRAKALLDFERHDDDELGFRKNDIIT-----------------------IISQKDEHC------W 531

  Fly   486 EKE-----------------SKSRRTTHARGDSIATIGRELTTVVRKNFARTLQQLIQHGLRIPA 533
            ..|                 .:|:..:.| ||...|.|  :|.:||......|:.|.:|||:.| 
  Rat   532 VGELNGLRGWFPAKFVEVLDERSKEYSIA-GDDSVTEG--VTDLVRGTLCPALKALFEHGLKKP- 592

  Fly   534 ESAASSLMVPFMRCLHPGPPVVPPAVGGDSQFLGLGRAMHAWELVLAYYRLKHGEEYNNTPAR-K 597
                 ||                           ||.|.|.|..:......:...::::..:| .
  Rat   593 -----SL---------------------------LGGACHPWLFIEEAAGREVERDFDSVYSRLV 625

  Fly   598 LSQSFQLDIVDAQAVTAKQSLLSAVGMILAMHRPYKRSNNAHFKAFVCAGLNSHLLVEWLNLILS 662
            |.::::|| .|.:.:|.::.|..||..:...|.......:...::.:|.|||..:|..||.::.|
  Rat   626 LCKTYRLD-EDGKVLTPEELLYRAVQSVNVTHDAAHAQMDVKLRSLICVGLNEQVLHLWLEVLCS 689

  Fly   663 CHELVDTYYSADSYVARTGFRDSLRSIDALSRFDFDLPVD 702
            ....|:.:|...|::...|:......:..|..|.|.|..|
  Rat   690 SLPTVEKWYQPWSFLRSPGWVQIKCELRVLCCFAFSLSQD 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3703NP_569874.1 RUN 516..703 CDD:280855 40/188 (21%)
Sgsm3NP_942082.2 TBC 127..338 CDD:214540 39/211 (18%)
SH3_SGSM3 497..549 CDD:212747 10/80 (13%)
RUN 576..727 CDD:397055 38/184 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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