DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3703 and Rundc1

DIOPT Version :9

Sequence 1:NP_569874.1 Gene:CG3703 / 31045 FlyBaseID:FBgn0040348 Length:711 Species:Drosophila melanogaster
Sequence 2:XP_006533098.1 Gene:Rundc1 / 217201 MGIID:2144506 Length:617 Species:Mus musculus


Alignment Length:739 Identity:244/739 - (33%)
Similarity:341/739 - (46%) Gaps:170/739 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 STIEGQLPAGPV------RAEDEEEEVEVEQEQQELLSERWSPLG---------ANYDDANSASS 65
            :|:|.....|.|      :|:|||||.|.|:......:.||:|:|         |.:.:|.:|. 
Mouse     2 ATVEVATELGTVVTAVGPKAKDEEEEEEEEESLPPCETVRWAPVGAVAEAGPGAATFSEAAAAE- 65

  Fly    66 GVDCELEPGLEKSEARRGSTGSELAR-LRSIEEEQELLTSSLLALTSHFAHVQLRVRQIVEAPAE 129
                  |||     |..||......| ||.:|.|:..|.|:||||:||||.||.|:||:|.....
Mouse    66 ------EPG-----AAPGSPSDATVRTLRRLEAERRQLDSALLALSSHFAQVQFRLRQVVRGAPA 119

  Fly   130 ERDQLLRDLEDFAFQGIP---------DAVQSKESH---PDKPASDGEKDHGPDSQ--------- 173
            |:.:|||:||||||:|.|         |.....||.   .|:|...|| |.|...|         
Mouse   120 EQQRLLRELEDFAFRGCPHVLGYEGLADPCGGDESDVLPGDRPRVRGE-DQGLSEQEKRERLETQ 183

  Fly   174 ------LIQQLKSQLTELEQIAYEAGEPGILPQHVLLEKQKFILDELRAKLNLQVEQHELPALST 232
                  ||.|||:||.:||..||:.|....|||.|:||:|:.|:|||..||::.:.: ::.:|||
Mouse   184 REKQKELILQLKTQLDDLETFAYQEGSYDSLPQSVVLERQRVIIDELIKKLDMNLNE-DISSLST 247

  Fly   233 EQLRHQVDNAIGEFVGPLKMKEQLVAQLKTQITDLERFIAFLQCDAIEGSVGDRLKLLSGAYNSY 297
            |:||.:||.|:.:.|.|:::|||||.||||||.|||.||:|:|     ..||..|:  :|.:...
Mouse   248 EELRQRVDAAVAQIVNPVRVKEQLVEQLKTQIRDLEMFISFIQ-----DEVGSPLQ--TGGHCEC 305

  Fly   298 AAKQTARSSQASYVATNAPATTATTPPSSGLGAHSSGESLHSKAHGLLDKASVLMQMFASTHLVK 362
            .|     |.:....:|....  :|.||..|.......:........|:.:|..::|:|..:.|  
Mouse   306 QA-----SGKVGIGSTRVGG--STLPPGPGKAKAEDAKRARETGLHLMRRALAVLQIFTVSQL-- 361

  Fly   363 PRTHDEFQQNSLKKTHKGNHWGDLRAQLEVDIQEVAALAATLSCDREKLANIKRALRKQQQQAES 427
            .....:..|...:::.....:..|..:|||.:..|..|                |||.|      
Mouse   362 GCATGQIPQTLWQRSQADRDYSHLLKRLEVSVDRVKQL----------------ALRHQ------ 404

  Fly   428 TEFSDTGNPVINSQNGALTLPPRCRRAVPTGHELAPYASGGAISSDSDEDISYSNFEWEKESKSR 492
                                        |..|         .|:|.:.:|:|....:        
Mouse   405 ----------------------------PHDH---------VITSANLQDLSLGGKD-------- 424

  Fly   493 RTTHARGDSIATIGRELTTVVRKNFARTLQQLIQHGLRIPAESAASSLMVPFMRCLHPGPPVVPP 557
                           ||||||||.....::.|:.|||.  |.|:..||::..:.||.|       
Mouse   425 ---------------ELTTVVRKELTVAVRDLLAHGLY--ASSSGMSLVMAPLACLLP------- 465

  Fly   558 AVGGDSQFLGLGRAMHAWELVLAYYRLKHGEEYNNTPARKLSQSFQLDIVDAQAVTAKQSLLSAV 622
                  .|......||.|||.:.||..|:|..|..:|||||||||.|.|:...|||.|||||:|:
Mouse   466 ------VFSSAPETMHPWELFVKYYHAKNGRAYVESPARKLSQSFALPIMGDTAVTPKQSLLTAI 524

  Fly   623 GMILAMHRPYKRSNNAHFKAFVCAGLNSHLLVEWLNLILSCHELVDTYYSADSYVARTGFRDSLR 687
            .::|..|.|:|||.::..||.||..||...||.|:|||.....|::.:|...||:|.|||..:|.
Mouse   525 HLVLTEHDPFKRSADSELKALVCMALNEQRLVSWVNLICKSGSLIEPHYQPWSYMAHTGFESALN 589

  Fly   688 SIDALSRFDFDLPVDLAIRHFRNI 711
            .:..||...|.||||||:|..:||
Mouse   590 LLSRLSSLKFSLPVDLAVRQLKNI 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3703NP_569874.1 RUN 516..703 CDD:280855 75/186 (40%)
Rundc1XP_006533098.1 Mplasa_alph_rch <167..>291 CDD:275316 58/130 (45%)
RUN 433..584 CDD:383089 66/165 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845479
Domainoid 1 1.000 181 1.000 Domainoid score I3469
eggNOG 1 0.900 - - E1_KOG3759
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15095
Inparanoid 1 1.050 341 1.000 Inparanoid score I2340
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45254
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007086
OrthoInspector 1 1.000 - - oto93336
orthoMCL 1 0.900 - - OOG6_107488
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3919
SonicParanoid 1 1.000 - - X5173
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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