DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3703 and rund-1

DIOPT Version :9

Sequence 1:NP_569874.1 Gene:CG3703 / 31045 FlyBaseID:FBgn0040348 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_508136.2 Gene:rund-1 / 180416 WormBaseID:WBGene00020572 Length:549 Species:Caenorhabditis elegans


Alignment Length:705 Identity:217/705 - (30%)
Similarity:319/705 - (45%) Gaps:195/705 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EQEQQELLSERWSPLGANY-----DDANSASSGVD-CELEPGLEKSEARRGSTGS-------ELA 90
            |.|..:||.|    ||.:.     :|:.....|:| .:.....|...||..|:.|       :..
 Worm     4 ELEASDLLVE----LGQSLKKRASEDSKEIVDGLDFYDTMSETEWKSARLSSSHSDDIGSLNDAL 64

  Fly    91 RLRSIEEEQELLTSSLLALTSHFAHVQLRVRQIVEAPAEERDQLLRDLEDFAFQGIPD--AVQSK 153
            |::.:|||||.|.:||.:|:||||.||.|::|:.||...:|.:||.||:.|||:|..|  .:|..
 Worm    65 RVQQLEEEQERLNNSLFSLSSHFAQVQFRIKQMNEADPSDRLKLLSDLQKFAFKGCTDMNELQRL 129

  Fly   154 ESHPDKPASDGEKDHGPDSQLIQQLKSQLTELEQIAYEAGEPGILPQHVLLEKQKFILDELRAKL 218
            .|..:......:|.:....:|::||:.|:.:||:.|||.|| |.||...:|:|||.:||:||.|:
 Worm   130 RSESESGNDVLDKQNERQKELLKQLREQVEDLERTAYENGE-GELPSTDILKKQKAVLDKLREKI 193

  Fly   219 NLQVEQHELPALSTEQLRHQVDNAIGEFVGPLKMKEQLVAQLKTQITDLERFIAFLQCDAIEGSV 283
            .|.:   ::..::..:::.|||:|:.:.|.|.|.|.|||.||:|||||||||:.|||        
 Worm   194 ELNL---DIDKMNQTEIQRQVDDALKQLVNPFKEKGQLVDQLQTQITDLERFVNFLQ-------- 247

  Fly   284 GDRLKLLSGAYNSYAAKQTARSSQASYVATNAPATTATTPPSSGLGAHSSGESLHSKAHGLLDKA 348
                            |:.|.:|.    .|....:..:||.|   ||.|...|..|...|     
 Worm   248 ----------------KENAENSN----QTTPVRSMGSTPLS---GAKSKNGSFLSGIIG----- 284

  Fly   349 SVLMQMFASTHLVKPRTHDEFQQNSLKKTHKGNHWGDLRA--QLEVD-IQEVAALAATLSCDREK 410
                   .||        ..||:|.||.|.||||:||.||  ||.|| .|:|......|:.|   
 Worm   285 -------CST--------GRFQKNQLKNTLKGNHYGDERAHVQLAVDATQQVLEKYTLLTFD--- 331

  Fly   411 LANIKRALRKQQQQAESTEFSDTGNPVINSQNGALTLPPRCRRAVPTGHELAPYASGGAISSDSD 475
                                        ::..|.|                              
 Worm   332 ----------------------------SATKGQL------------------------------ 338

  Fly   476 EDISYSNFEWEKESKSRRTTHARGDSIATIGRELTTVVRKNFARTLQQLIQHGL--------RIP 532
            |::...|.|..:.|:                .|:.|:|||.....|:.|::||:        |||
 Worm   339 EEVQVENDEVFERSE----------------EEVVTIVRKQLCLALKALLEHGMLSETVVHKRIP 387

  Fly   533 ------AESAASSLMVPFMRCLHPGPPVVPPAVGGDSQFLGLGRAMHAWELVLAYYRLKHGEEYN 591
                  |:|:|                        |.:...|.   |.|:::|.:|.||.|.:..
 Worm   388 GLGCFVAKSSA------------------------DEKSTSLS---HIWDVILYFYNLKTGRDTT 425

  Fly   592 NTPARKLSQSFQLDIVDAQAVTAKQSLLSAVGMILAMHRPYKRSNNAHFKAFVCAGLNSHLLVEW 656
            :.|.|||||||:||.|..:::|:||.||:.:..|::.|...|||.:||:||||.|.||...|..|
 Worm   426 DAPVRKLSQSFKLDHVGGRSITSKQVLLTTIENIISTHARLKRSKDAHWKAFVSAALNEKKLPAW 490

  Fly   657 LNLILSCHELVDTYYSADSYVARTGFRDSLRSIDALSRFDFDLPVDLAIRHFRNI 711
            |.:|....::|:..|::.|||||||..:....::.|.::...||||||:|.|..|
 Worm   491 LRIIFRTRQVVEMCYNSWSYVARTGCEELYTLLEGLHKYSIHLPVDLALRPFEQI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3703NP_569874.1 RUN 516..703 CDD:280855 66/200 (33%)
rund-1NP_508136.2 Smc <45..>256 CDD:224117 89/242 (37%)
RUN 474..536 CDD:214736 23/61 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163630
Domainoid 1 1.000 157 1.000 Domainoid score I2539
eggNOG 1 0.900 - - E1_KOG3759
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 289 1.000 Inparanoid score I1700
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45254
OrthoDB 1 1.010 - - D255049at33208
OrthoFinder 1 1.000 - - FOG0007086
OrthoInspector 1 1.000 - - oto19831
orthoMCL 1 0.900 - - OOG6_107488
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3919
SonicParanoid 1 1.000 - - X5173
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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