DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3703 and rundc1

DIOPT Version :9

Sequence 1:NP_569874.1 Gene:CG3703 / 31045 FlyBaseID:FBgn0040348 Length:711 Species:Drosophila melanogaster
Sequence 2:XP_005164020.1 Gene:rundc1 / 100537899 ZFINID:ZDB-GENE-100311-1 Length:571 Species:Danio rerio


Alignment Length:688 Identity:225/688 - (32%)
Similarity:329/688 - (47%) Gaps:164/688 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ERWSPLG--ANYDD--------ANSASSGVDCELEPGLEKSEARRGSTGSELARLRSIEEEQELL 102
            |||:|:|  ||.:|        |.|.|||                  .|..::|||.:|:|||.|
Zfish    20 ERWAPVGAVANPEDEHWKTGAQAGSVSSG------------------DGEMVSRLRKMEDEQEQL 66

  Fly   103 TSSLLALTSHFAHVQLRVRQIVEAPAEERDQLLRDLEDFAFQGIPDAV--QSKESH---PDKPAS 162
            .|||||||||||.||.|::|||.|.::|::::|.:||:|||:|.|..|  :::::|   .....|
Zfish    67 NSSLLALTSHFAQVQFRLKQIVHAQSDEKERMLLELEEFAFRGCPHVVGCRAQDAHMLENSDELS 131

  Fly   163 DGEK------DHGPDSQLIQQLKSQLTELEQIAYEAGEPGILPQHVLLEKQKFILDELRAKLNLQ 221
            :.||      ......:||.|||:||.:||:.||:.|....|||.|::|:|:.|:|||..||::.
Zfish   132 EREKRERLEAQRNKQKELIFQLKNQLDDLERFAYQEGSYDSLPQSVVMERQRVIIDELIKKLDVN 196

  Fly   222 VEQHELPALSTEQLRHQVDNAIGEFVGPLKMKEQLVAQLKTQITDLERFIAFLQCDAIEGSVGDR 286
            :.: ::..|:.|:||.:||.||.:.|.|.::|||||.||||||.|||.||.|:|     ..||:.
Zfish   197 LNE-DIGNLTPEELRQRVDAAIAQIVNPARVKEQLVEQLKTQIRDLEMFINFIQ-----DEVGNP 255

  Fly   287 LKLLSGAYNSYAAKQTARSSQASYVATNAPATTATTPPSSGLGAHSSGESLHSKAHG--LLDKAS 349
            | |..|.           .||.::.|  .|.|.||    .|:......::...:..|  |:.||.
Zfish   256 L-LNDGT-----------KSQPTHAA--GPNTGAT----GGVKRVDPEQAQRMRETGLQLIQKAL 302

  Fly   350 VLMQMFASTHLVKPRTHDEFQQNSLKKTHKGNHWGDLRAQLEVDIQEVAALAATLSCDREKLANI 414
            .::|:||.:.......|  ..||...:..:...:|.|..:||..::.|                 
Zfish   303 AVLQIFALSQFGCAAGH--VPQNMWSQGAEAQDYGPLLQKLEGAVERV----------------- 348

  Fly   415 KRALRKQQQQAESTEFSDTGNPVINSQNGALTLPPRCRRAVPTGHELAPYASGGAISSDSDEDIS 479
              .|:..:.|..|.:                             ..:..|::  ::|.:...|  
Zfish   349 --RLQASRHQPSSLD-----------------------------EHVVSYSA--SLSPEGPRD-- 378

  Fly   480 YSNFEWEKESKSRRTTHARGDSIATIGRELTTVVRKNFARTLQQLIQHGLRIPAESAASSLMVPF 544
                                        |||..|||..|..|:.|:.|||..|  |...||::..
Zfish   379 ----------------------------ELTASVRKELAIALRDLLAHGLYAP--SQGMSLVLAP 413

  Fly   545 MRCLHPGPPVVPPAVGGDSQFLGLGRAMHAWELVLAYYRLKHGEEYNNTPARKLSQSFQLDIVDA 609
            :.||.|              |....:.:|.|||.:.||..|:|:.:..:|||:|||||.|.:...
Zfish   414 ISCLLP--------------FSSSPQTLHPWELFVKYYHSKNGQAFVESPARQLSQSFSLPVGGG 464

  Fly   610 Q-AVTAKQSLLSAVGMILAMHRPYKRSNNAHFKAFVCAGLNSHLLVEWLNLILSCHELVDTYYSA 673
            . .||.|||||.|:..:|..||.:|||.::.|||.||..||...||.||||:.....|:.::|..
Zfish   465 PVTVTPKQSLLWAIHTVLKEHRRFKRSTDSEFKALVCMALNEQRLVSWLNLLCKSGTLIHSHYQP 529

  Fly   674 DSYVARTGFRDSLRSIDALSRFDFDLPVDLAIRHFRNI 711
            .||:|:|||..:||.:..:|...|.||||||:|..:||
Zfish   530 WSYMAQTGFEGALRILGRISHLKFSLPVDLAVRQLKNI 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3703NP_569874.1 RUN 516..703 CDD:280855 73/187 (39%)
rundc1XP_005164020.1 RUN 387..559 CDD:280855 73/187 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590046
Domainoid 1 1.000 179 1.000 Domainoid score I3494
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15095
Inparanoid 1 1.050 326 1.000 Inparanoid score I2460
OMA 1 1.010 - - QHG45254
OrthoDB 1 1.010 - - D255049at33208
OrthoFinder 1 1.000 - - FOG0007086
OrthoInspector 1 1.000 - - oto39698
orthoMCL 1 0.900 - - OOG6_107488
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3919
SonicParanoid 1 1.000 - - X5173
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

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