DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus81 and UVH1

DIOPT Version :10

Sequence 1:NP_569873.1 Gene:mus81 / 31044 FlyBaseID:FBgn0040347 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_198931.1 Gene:UVH1 / 834117 AraportID:AT5G41150 Length:956 Species:Arabidopsis thaliana


Alignment Length:378 Identity:75/378 - (19%)
Similarity:142/378 - (37%) Gaps:110/378 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VRKVQEKQLEHQKRQNKC-----DRPRKLTKKDLAELAALEERERVVRMKPGQFQLLLLVD---- 158
            ||:::..:.|:..|:.|.     |...::.|.:.:.....|..|.::|.|.   .:::.||    
plant   630 VRELEVYKAENPLRKLKVYFIFYDESTEVQKFEASIRRENEAFESLIRQKS---SMIIPVDQDGL 691

  Fly   159 -------------------TQETSG-----KNKRVLDQTRSYLESL-------GARHEVRRLTIG 192
                               |::..|     |..:|:...|.::.||       |.:.....|.:|
plant   692 CMGSNSSTEFPASSTQNSLTRKAGGRKELEKETQVIVDMREFMSSLPNVLHQKGMKIIPVTLEVG 756

  Fly   193 DFLWVAQDQEGNELVLPYI-VERKRMDDLASSIRDGR-FHEQKHRLQHCGLQHIIYLVEDYGDNE 255
            |:           ::.|.| ||||.:.||..|...|| ||:.:...::   ..|..|:.::..::
plant   757 DY-----------ILSPSICVERKSIQDLFQSFTSGRLFHQVEMMSRY---YRIPVLLIEFSQDK 807

  Fly   256 QLGLPLDSLQQALTNAKVQTGVRVVRTAN----HYRSMSYLAGMSRTL---GQIFAGKKLHSVDR 313
            ..     |.|.:...:...|...::...:    |:..:..|  .||:|   .:||...|.:..:.
plant   808 SF-----SFQSSSDISDDVTPYNIISKLSLLVLHFPRLRLL--WSRSLHATAEIFTTLKSNQDEP 865

  Fly   314 GAIDQSTCLL--THSDLGLLK--FRA-LYEDSAKNAQLTVREVFVQQLLQLHSLSLERAMAIVER 373
               |::..:.  ..|:.|:::  .|| .|..||           |:.|.:|..:|.....:|:|:
plant   866 ---DETRAIRVGVPSEEGIIENDIRAENYNTSA-----------VEFLRRLPGVSDANYRSIMEK 916

  Fly   374 YPTPRWLLDAYAECADQKQARLLLASIPCGPLERPL-GDKISQCLHEFYSTHF 425
                         |....:    |||:|...|...: |.|:::.|.||....:
plant   917 -------------CKSLAE----LASLPVETLAELMGGHKVAKSLREFLDAKY 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus81NP_569873.1 NT_Pol-beta-like 16..>96 CDD:472251
XPF_nuclease_Mus81 150..299 CDD:410850 35/189 (19%)
UVH1NP_198931.1 rad1 87..948 CDD:273163 74/372 (20%)
Blue background indicates that the domain is not in the aligned region.

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