DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus81 and mus-81

DIOPT Version :9

Sequence 1:NP_569873.1 Gene:mus81 / 31044 FlyBaseID:FBgn0040347 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_491341.1 Gene:mus-81 / 172027 WormBaseID:WBGene00016602 Length:445 Species:Caenorhabditis elegans


Alignment Length:470 Identity:104/470 - (22%)
Similarity:200/470 - (42%) Gaps:104/470 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NPLFTRWLERWLREAERREQKSQFSLRQALESLKSYPLPLASGRDCSILRGFGGTLCQLIDE--- 74
            |..|.:.|:  .:..|:.::|.::.|.:|.|:|:..|..:.:..|...::|.|..:...::|   
 Worm    17 NTFFEKVLK--FQHQEQEDRKLKYVLHKAHENLRKCPFEILTIVDLKNVQGIGENIALKLEETWN 79

  Fly    75 -ELRHHRGLQLLPQEAVVQ----------ERYEQQVQAVVRKVQE-KQLEHQKR-------QNKC 120
             ..|.:.|     |:..::          .|:....::...:::: |:||.||.       :|:.
 Worm    80 VACRENNG-----QDPTLRSIKKFTTDDYRRFLTNRKSTTERMKDAKRLEKQKSTKTIVDIENEF 139

  Fly   121 DRPRKLTKKDLAELAALEE-------RERVVRMKPG-------------------QFQLL----- 154
            :......|:....|...:.       :..::|.:.|                   .|:||     
 Worm   140 ESDGDDDKQPSVPLTKTKSFQVSKPVQPSLIRSQSGNLSSSSSTSSSSSNSSDPLSFRLLTCRPF 204

  Fly   155 ------LLVDTQETSGKNKRVLDQTRSYLESLGARHEVRRLTIGDFLWVAQDQEGNELVLPYIVE 213
                  |:.|.:| ...|.|........::....|.::|.|::||::|:.:..:|.|:|:.::||
 Worm   205 EQPTVYLIADNRE-HRNNPRFKSVIEHLVKKEDIRVDIRSLSVGDYIWICRKIDGTEIVMDWVVE 268

  Fly   214 RKRMDDLASSIRDGRFHEQKHRLQHCGLQHIIYLVE--DYGDNEQLGLPLDSLQQALTNAKVQTG 276
            ||..|||.||||.||:.|||.||....:::.:||:|  ..||        .:.:||:.:.....|
 Worm   269 RKTWDDLQSSIRGGRYDEQKGRLNMAPMKNRVYLIEAQHKGD--------VACEQAVASTLSNGG 325

  Fly   277 VRVVRTANHYRSMSYLAGMSRTLGQIFAGKKLHSVDRGAIDQSTCLLTHSDLGLLKFRALYEDSA 341
            ..:.|.::...:.::|..::           :...::.||:         ::..:.|..|.....
 Worm   326 YLIQRCSDTRDTAAFLKEVT-----------IRLQNKAAIE---------EISGVPFSQLQNLLQ 370

  Fly   342 KNAQLTVREVFVQQLLQLHSLSLERAMAIVERYPTPRWLLDAYAECADQKQARLLLASIPCGPLE 406
            |....||:|.:|:||:....:|..||.||.:|:|:...||..:....|....| ||..:|  .|.
 Worm   371 KKKAETVKEAWVRQLMVCPGMSQNRAEAIADRFPSMVSLLSYFRANGDDAPIR-LLQLLP--QLT 432

  Fly   407 RPLGDKISQCLHEFY 421
            ||    |::.|.:|:
 Worm   433 RP----ITRNLFKFF 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus81NP_569873.1 NT_Pol-beta-like 16..>96 CDD:299849 17/93 (18%)
ERCC4 157..295 CDD:280828 41/139 (29%)
mus-81NP_491341.1 ERCC4 214..342 CDD:376909 40/136 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161128
Domainoid 1 1.000 72 1.000 Domainoid score I6106
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I3679
Isobase 1 0.950 - 0 Normalized mean entropy S3470
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D470169at33208
OrthoFinder 1 1.000 - - FOG0003734
OrthoInspector 1 1.000 - - oto18296
orthoMCL 1 0.900 - - OOG6_103117
Panther 1 1.100 - - LDO PTHR13451
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R782
SonicParanoid 1 1.000 - - X2590
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.880

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