DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus81 and eme-1

DIOPT Version :9

Sequence 1:NP_569873.1 Gene:mus81 / 31044 FlyBaseID:FBgn0040347 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_490757.3 Gene:eme-1 / 171652 WormBaseID:WBGene00018923 Length:454 Species:Caenorhabditis elegans


Alignment Length:383 Identity:79/383 - (20%)
Similarity:140/383 - (36%) Gaps:104/383 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IDEELRHHR----GLQLLPQEAV---VQERYEQQVQAVVRKVQEKQL-EHQKRQNKCDRPRKLTK 128
            :||.:|.::    .|....||..   |..|.|::......|..:|:| |:.||..:.::.||..:
 Worm    65 LDEMIRQNQTSSYSLCSSSQENTDINVVARPEKRKLTDDEKETQKELRENAKRAREAEKERKTLE 129

  Fly   129 KD--LAELA-ALEERERVVRMKPGQFQLLLLVDTQETSGK---------NKRVLDQTRS------ 175
            ||  .:|:| ..||:|:....:..:.::     :..|:.|         .|.|:|....      
 Worm   130 KDKKKSEMARRREEKEKDKETRKIEREI-----SAATNSKCELYTFCHVGKTVIDTWHGLEAELS 189

  Fly   176 --YLE-----------SLGARHEVRRLTIGDFLWVAQDQEGNELVLPY---------IVERKRMD 218
              |:|           |||.|.|.||..:.    :.:|..|......|         :|..:.:.
 Worm   190 VLYVERKIDNQLKIDTSLGTRIEWRRKCVE----LREDDSGRSERFEYSSTQNLFAVVVPAETLK 250

  Fly   219 DLASSIRDGRF-HEQKHRLQHCGLQHIIYLVEDYGDNE--------QLGLPLDSLQQALTNAKVQ 274
            |:.||.....| .|||...|:.|  ....|:..:|..|        .|.|.:....:|.. .:::
 Worm   251 DVISSNTLSDFIIEQKSGFQNGG--RCTMLIVSFGRAEIAKKKKLHNLSLQIYEQHRAQI-VQIE 312

  Fly   275 TGVRV-VRTANHYRSMSYLAGMSRTLGQIFAG----------KKLHSVDRGAIDQSTCLLTHSDL 328
            |...: :.||.:.||::.........|....|          |..:..|:|.:     :.:.|::
 Worm   313 TIAELALFTAQYLRSLARQEKKKLDAGSDGGGGGGAGGAGGHKLQYQGDKGIV-----IGSRSEI 372

  Fly   329 GLLKFRALYEDSAKNAQLTVREVFVQQLLQLHSLSLERAMAIVERYPTPRWLLDAYAE 386
                               |.:.:.:.|..:..||..:..||:|..|.|...:|.|::
 Worm   373 -------------------VTDWWSKMLTTIDRLSDAQRRAILELIPDPIAAIDKYSK 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus81NP_569873.1 NT_Pol-beta-like 16..>96 CDD:299849 8/30 (27%)
ERCC4 157..295 CDD:280828 38/184 (21%)
eme-1NP_490757.3 Peptidase_S49_N <98..>148 CDD:285669 15/49 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13451
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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