DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus81 and eme-1

DIOPT Version :10

Sequence 1:NP_569873.1 Gene:mus81 / 31044 FlyBaseID:FBgn0040347 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_490757.3 Gene:eme-1 / 171652 WormBaseID:WBGene00018923 Length:454 Species:Caenorhabditis elegans


Alignment Length:383 Identity:79/383 - (20%)
Similarity:140/383 - (36%) Gaps:104/383 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IDEELRHHR----GLQLLPQEAV---VQERYEQQVQAVVRKVQEKQL-EHQKRQNKCDRPRKLTK 128
            :||.:|.::    .|....||..   |..|.|::......|..:|:| |:.||..:.::.||..:
 Worm    65 LDEMIRQNQTSSYSLCSSSQENTDINVVARPEKRKLTDDEKETQKELRENAKRAREAEKERKTLE 129

  Fly   129 KD--LAELA-ALEERERVVRMKPGQFQLLLLVDTQETSGK---------NKRVLDQTRS------ 175
            ||  .:|:| ..||:|:....:..:.::     :..|:.|         .|.|:|....      
 Worm   130 KDKKKSEMARRREEKEKDKETRKIEREI-----SAATNSKCELYTFCHVGKTVIDTWHGLEAELS 189

  Fly   176 --YLE-----------SLGARHEVRRLTIGDFLWVAQDQEGNELVLPY---------IVERKRMD 218
              |:|           |||.|.|.||..:.    :.:|..|......|         :|..:.:.
 Worm   190 VLYVERKIDNQLKIDTSLGTRIEWRRKCVE----LREDDSGRSERFEYSSTQNLFAVVVPAETLK 250

  Fly   219 DLASSIRDGRF-HEQKHRLQHCGLQHIIYLVEDYGDNE--------QLGLPLDSLQQALTNAKVQ 274
            |:.||.....| .|||...|:.|  ....|:..:|..|        .|.|.:....:|.. .:::
 Worm   251 DVISSNTLSDFIIEQKSGFQNGG--RCTMLIVSFGRAEIAKKKKLHNLSLQIYEQHRAQI-VQIE 312

  Fly   275 TGVRV-VRTANHYRSMSYLAGMSRTLGQIFAG----------KKLHSVDRGAIDQSTCLLTHSDL 328
            |...: :.||.:.||::.........|....|          |..:..|:|.:     :.:.|::
 Worm   313 TIAELALFTAQYLRSLARQEKKKLDAGSDGGGGGGAGGAGGHKLQYQGDKGIV-----IGSRSEI 372

  Fly   329 GLLKFRALYEDSAKNAQLTVREVFVQQLLQLHSLSLERAMAIVERYPTPRWLLDAYAE 386
                               |.:.:.:.|..:..||..:..||:|..|.|...:|.|::
 Worm   373 -------------------VTDWWSKMLTTIDRLSDAQRRAILELIPDPIAAIDKYSK 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus81NP_569873.1 NT_Pol-beta-like 16..>96 CDD:472251 8/30 (27%)
XPF_nuclease_Mus81 150..299 CDD:410850 38/195 (19%)
eme-1NP_490757.3 PTZ00121 <94..>166 CDD:173412 19/76 (25%)

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