DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3704 and Gpn1

DIOPT Version :9

Sequence 1:NP_569872.1 Gene:CG3704 / 31043 FlyBaseID:FBgn0040346 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001121044.1 Gene:Gpn1 / 688393 RGDID:1589985 Length:373 Species:Rattus norvegicus


Alignment Length:369 Identity:183/369 - (49%)
Similarity:248/369 - (67%) Gaps:19/369 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEGIRESPVCILVLGMAGSGKTTFTQKLIQHAQEK-FNPYVVNLDPACREVPYAAHVDIRDTVNY 79
            :.|..|.|||:|||||||||||||.|:|..|...| ..|||:|||||..|||:.|::||||||.|
  Rat    12 ASGAPELPVCLLVLGMAGSGKTTFVQRLTGHLHNKGCPPYVINLDPAVHEVPFPANIDIRDTVKY 76

  Fly    80 REVMKQYQLGPNGGIVTALNMFTTKMAQFAELVRRAGERGHKWCVIDTPGQIEVFNWSASGSIIT 144
            :||||||.|||||||||:||:|.|:..|..:.:.:| :...::.:||||||||||.|||||:|||
  Rat    77 KEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKA-QNTFRYVLIDTPGQIEVFTWSASGTIIT 140

  Fly   145 EGLATMFPTIVVYVMDVERSACPTTFMSNMLYACSILYKTRLPFLVALNKIDLKDCGFVMDWMTD 209
            |.||:.|||:|:||||..||..|.||||||||||||||||:|||:|.:||.|:.|..|.::||.|
  Rat   141 EALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQD 205

  Fly   210 FEAFQEAQEEEHSFVSNLTRTMSLTLDTFYENLRTCGVSAKTGVGFTQLLTKILESVDEYETDYK 274
            |||||:|..:|.::||||||:|||.||.||.:||..||||..|.||.:|..::..:.:|||.:|:
  Rat   206 FEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVVGTGFDELCAQVTSAAEEYEREYR 270

  Fly   275 PVYEK-KRQERLAESATGPKPVDHVEEDGHAVPLGLSLQDPPPHTGNSIFLMAPS--LVPESAEI 336
            |.||: |:....|:|....:.::.:.:|..::.|     ||...|..:..::.||  ::......
  Rat   271 PEYERLKKSLASAQSNEQKEQLERLRKDMGSIAL-----DPGASTDGASPVLDPSDLILTRGTLD 330

  Fly   337 EDEEEMEED--------AKGTAEEQNFHSFVQNHLTAQQSKRDK 372
            |::||.:.|        .:.:.||..|.:|:|..: ||..||:|
  Rat   331 EEDEEADSDTDDIDHRVTEESREEPAFQNFMQESI-AQHWKRNK 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3704NP_569872.1 Gem1 24..199 CDD:224025 114/175 (65%)
ATP_bind_1 28..268 CDD:281079 146/240 (61%)
Gpn1NP_001121044.1 GPN1 20..259 CDD:349779 149/239 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354388
Domainoid 1 1.000 299 1.000 Domainoid score I1396
eggNOG 1 0.900 - - E1_KOG1532
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5257
Inparanoid 1 1.050 345 1.000 Inparanoid score I2251
OMA 1 1.010 - - QHG54774
OrthoDB 1 1.010 - - D1096688at2759
OrthoFinder 1 1.000 - - FOG0005260
OrthoInspector 1 1.000 - - oto98785
orthoMCL 1 0.900 - - OOG6_101544
Panther 1 1.100 - - LDO PTHR21231
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3783
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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