DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRAM and LAG1

DIOPT Version :10

Sequence 1:NP_726710.1 Gene:TRAM / 31042 FlyBaseID:FBgn0040340 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_011860.1 Gene:LAG1 / 856386 SGDID:S000000995 Length:411 Species:Saccharomyces cerevisiae


Alignment Length:307 Identity:65/307 - (21%)
Similarity:124/307 - (40%) Gaps:70/307 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IISCV-AMVFVVGLMNESTAAFASAFISLHHNVSGEDPSREQPYGKPYTYIAGIKDYCAIFFYTL 94
            |:.|| :..|:.|...||..  ...|:::.:.|.|.|           :|..||||...:|||  
Yeast    90 ILVCVYSAYFLSGNRTESNP--LHMFVAISYQVDGTD-----------SYAKGIKDLSFVFFY-- 139

  Fly    95 TCIIMHAIIQEFVLDKISKKLHL-----SKFKLARFNESGQLVAFYLLSFVWGAHVLL-KEGYLG 153
              :|....::||::|.:.:...:     |:.:..|..|....:.:..:|..:|.:::. .:.:|.
Yeast   140 --MIFFTFLREFLMDVVIRPFTVYLNVTSEHRQKRMLEQMYAIFYCGVSGPFGLYIMYHSDLWLF 202

  Fly   154 QVAQLWEGFPDHPMSFLHKFYFVVQLAYYLHMLPELYFQKIKTKEEQQPKIVHSISGFTLIVLAY 218
            :...::..:|.....||.|.:::.|.|::......|..|..|.:::.:..:.|.|....||..:|
Yeast   203 KTKPMYRTYPVITNPFLFKIFYLGQAAFWAQQACVLVLQLEKPRKDYKELVFHHIVTLLLIWSSY 267

  Fly   219 TLSFQRLALVLL--------------TLHYFSELLSHVFQ--LIGVFDREERLAKLRVVNNAVFF 267
            ...|.::.|.:.              ||:|    |:.||.  :.|:|               |||
Yeast   268 VFHFTKMGLAIYITMDVSDFFLSLSKTLNY----LNSVFTPFVFGLF---------------VFF 313

  Fly   268 LIRFATSVIGVLTLYYGIGGVRSLLALGGLIALQGYLVFSFITEQLR 314
            .| :...|:.:..|:..:...|.          :|..|.:|.|:|.:
Yeast   314 WI-YLRHVVNIRILWSVLTEFRH----------EGNYVLNFATQQYK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRAMNP_726710.1 TRAM1 52..121 CDD:462460 17/73 (23%)
TLC 124..290 CDD:214789 35/182 (19%)
LAG1NP_011860.1 LAG1 8..411 CDD:227391 65/307 (21%)

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