Protein Alignment TRAM and tram2

DIOPT Version :9

• Sequence 1: NP_001245456.1
• Gene: TRAM / 31042
• FlyBaseID: FBgn0040340
• Length: 368
• Species: Drosophila melanogaster
• Sequence 2: NP_998236.1
• Gene: tram2 / 406344
• ZFINID: ZDB-GENE-040426-2024
• Length: 371
• Species: Danio rerio
• Alignment Length: 382
• Identity: 142/382 - (37%)
• Similarity: 207/382 - (54%)
• Gaps: 45/382 - (11%)

  Fly    13 NKNPPILSHEFVIQNHADIISCVAMVFVVGLMNESTAAFASAFISLHHNVS--GEDPSREQPYGK 75
            ||:.|..|.||:|||||||:..:.:..::|||.|:||..|..||...:|:|  ..|       |:
Zfish     7 NKSYPFFSQEFLIQNHADIVFSLVIFILIGLMFETTAKTAILFIQPQYNISLMSAD-------GE 64

  Fly    76 PYTYIAGIKDYCAIFFYTLTCIIMHAIIQEFVLDKISKKLHLSKFKLARFNESGQLVAFYLLSFV 140
            ...|..|.||...:.||....||:||::||:||||::::|||||.|..:|||||||..|||:|.|
Zfish    65 VTLYHYGWKDCATVLFYLCITIILHAVVQEYVLDKVNRRLHLSKSKNTKFNESGQLCVFYLVSSV 129

  Fly   141 WGAHVLLKEGYLGQVAQLWEGFPDHPMSFLHKFYFVVQLAYYLHMLPELYFQKIKTKEEQQPKIV 205
            |..:|:..||:|...:.|||.:|...:.|..||:::.||||::|.||||||||:  ::|:.|:.:
Zfish   130 WSLYVITTEGHLLHPSSLWENYPHVHLRFQVKFFYLTQLAYWIHALPELYFQKV--RKEEIPRQL 192

  Fly   206 HSISGFTL-IVLAYTLSFQRLALVLLTLHYFSELLSHVFQLIGVFDREERLAKLRVVNNAVFFLI 269
            ..||.:.| |:.||.|:..|:.||||.|.|.||:..|:.:|....|  |...|:..:.:..|.|.
Zfish   193 QYISLYLLHILAAYLLNLTRVGLVLLFLQYLSEMGFHLSRLFYFID--ENHHKMFEMWSVGFVLT 255

  Fly   270 RFATSVIGVLTLYY---GIGGVRS------------------LLALGGLIALQGYLVFSFITEQL 313
            |..|     |||.:   |.|..||                  ||.|..:...|.:|::.|...||
Zfish   256 RMIT-----LTLMFLAVGFGLARSENQTLDLETGNFNTLSIRLLVLSVVCFTQSWLLWKFFRFQL 315

  Fly   314 RAKREAKKE--AKREAKLALQTKKPAKTPKDKVKRKKESDLPEADQTSPSPIKQKLK 368
            ...||.:.|  |::.|....|.::..|  :|......|:.|.:| :...||..:|:|
Zfish   316 SRTRELRLEQAARKRAAAKQQMQRTVK--RDTAVGHHENGLLKA-ENGTSPRLKKIK 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TRAM	NP_001245456.1	TRAM1	52..121	CDD:285576	28/70 (40%)
		TLC	124..290	CDD:214789	69/169 (41%)
tram2	NP_998236.1	TRAM1	49..110	CDD:285576	27/67 (40%)
		TRAM_LAG1_CLN8	113..312	CDD:281751	77/207 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170583979
Domainoid	1	1.000	130	1.000	Domainoid score	I5166
eggNOG	1	0.900	-	-		E1_KOG1608
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	264	1.000	Inparanoid score	I3058
OMA	1	1.010	-	-		QHG49031
OrthoDB	1	1.010	-	-		D496777at33208
OrthoFinder	1	1.000	-	-		FOG0002124
OrthoInspector	1	1.000	-	-		otm26030
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR12371
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1077
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	13	12.870