DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3708 and Nap1l4

DIOPT Version :9

Sequence 1:NP_569871.2 Gene:CG3708 / 31039 FlyBaseID:FBgn0040345 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001012170.1 Gene:Nap1l4 / 361684 RGDID:1305391 Length:386 Species:Rattus norvegicus


Alignment Length:370 Identity:122/370 - (32%)
Similarity:201/370 - (54%) Gaps:33/370 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GMADSAEGVTQEDSHTESRADGISGSLRSLGTYTQESTEPALSPADLPARSRKAFLRHMIGQLAE 67
            |.|||.| ..:..|:||...|.:..:.:.|....:.....:.:|:.            .|..|.:
  Rat    10 GPADSVE-AAKNASNTEKLTDQVMQNPQVLAALQERLDNVSHTPSS------------YIETLPK 61

  Fly    68 PVQNRIRALRHNQLQQVRISEQFFREVYELERRFYGQSCALFDARRDILEGSVEPPIQTEKTW-- 130
            .|:.||.||:..|::...|..:|:.||::|||::......|||.||:.:.|.|| |...|..|  
  Rat    62 AVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVE-PTDAESAWHS 125

  Fly   131 PEDPQDALYLDFGNNEELRQLRQKLAPVSPTTLGVPRFWLTVFQNVPLLSELVQDHDEPLLESLM 195
            ..:..|.|..|..|...:.: ::..|.......|:|.||.|:|:||.:||||||::|||:|:.|.
  Rat   126 ENEEDDKLAGDMKNKVVIAE-KEAAAVEELNPKGIPEFWFTIFRNVDMLSELVQEYDEPILKHLQ 189

  Fly   196 DVRLAYDQD----SYMVIFQFRPNSFLHDSSLLLTKRYFLQHSADPEYPFLFEGPEIVRCEGCHI 256
            |:::.:...    |:::.|.|.||.:.  ::.:|||.|.::...|...||.|||||||.|:||.|
  Rat   190 DIKVKFSDPGQPMSFVLEFHFEPNDYF--TNPVLTKTYKMKSEPDKADPFSFEGPEIVDCDGCTI 252

  Fly   257 HWRDGSNLTLQTVESRRRNR----AHRVTKVMPRESFFRFFAPPQAL-DLSLADEKTKLILGNDF 316
            .|:.|.|:|::|::.:::::    ...:||.:|.||||.||:|.:|. |....||.::..|.:||
  Rat   253 DWKKGKNVTVKTIKKKQKHKGRGTVRTITKQVPNESFFNFFSPLKASGDGESLDEDSEFTLASDF 317

  Fly   317 EVGFLLRTQIVPKAVLFYTGDLVDSLSAASPDSRSLSSEAEQEQV 361
            |:|...|.:|||:|||::||:.::     ..|:.....|.|:|::
  Rat   318 EIGHFFRERIVPRAVLYFTGEAIE-----DDDNFEEGEEGEEEEL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3708NP_569871.2 NAP 71..336 CDD:279323 102/275 (37%)
Nap1l4NP_001012170.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 8/18 (44%)
NAP 67..337 CDD:366386 101/273 (37%)
Nuclear localization signal. /evidence=ECO:0000255 265..271 0/5 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..386 4/24 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53841
OrthoDB 1 1.010 - - D1216172at2759
OrthoFinder 1 1.000 - - FOG0000988
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X426
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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