DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3708 and Tspyl4

DIOPT Version :10

Sequence 1:NP_569871.2 Gene:CG3708 / 31039 FlyBaseID:FBgn0040345 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001012075.1 Gene:Tspyl4 / 309828 RGDID:1306653 Length:407 Species:Rattus norvegicus


Alignment Length:325 Identity:62/325 - (19%)
Similarity:104/325 - (32%) Gaps:130/325 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GMADSA----EGVTQE-------DSHTESRADGISGSLRSLGTYTQESTEPALSPADLPARSRKA 56
            |.|.:|    :||.:|       ...|..||..|:..:.||....||.       :::.|::.:|
  Rat   160 GEAGAAMQEKKGVQKEKKAAGGGKDETRPRAPKINNCMDSLEAIDQEL-------SNVNAQADRA 217

  Fly    57 FLRHMIGQLAEPVQNRIRALRHNQLQQVRISEQFFREVYELERRFYGQSCALFDARRDILEGSVE 121
            ||                                     :|||:| |:...|...||..:     
  Rat   218 FL-------------------------------------QLERKF-GRMRRLHMQRRSFI----- 239

  Fly   122 PPIQTEKTWPEDPQDALYLDFGNNEELRQLRQKLAPVSPTTLGVPRFWLTVFQNVPLLSELVQDH 186
              ||                                      .:|.||:|.|:|.|.||.::...
  Rat   240 --IQ--------------------------------------NIPGFWVTAFRNHPQLSPMISGQ 264

  Fly   187 DEPLLESLMDV---RLAYDQDSYMVIFQFRPNSFLHDSSLLLTKRYFLQHSADPEYPFLFEGPEI 248
            ||.::..::::   .|.:.:......|.|:.|.:..:..|:  |.|..:.|.           .:
  Rat   265 DEDMMRYMINLEVEELKHPRAGCKFKFIFQSNPYFRNEGLV--KEYERRSSG-----------RV 316

  Fly   249 VRCEGCHIHWRDGSNLTLQTVESRRRNRAHRVTKVMPRESFFRFFAPPQALDLSLADEKTKLILG 313
            |.. ...|.|..|.       |.:.....:|....:|  |||.:|:....|:.   |...::|.|
  Rat   317 VSL-STPIRWHRGQ-------EPQAHIHRNREGNTIP--SFFNWFSDHSLLEF---DRIAEIIKG 368

  Fly   314  313
              Rat   369  368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3708NP_569871.2 NAP 71..337 CDD:460010 44/246 (18%)
Tspyl4NP_001012075.1 PTZ00007 219..379 CDD:471807 45/259 (17%)

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